Co-expression analysis

Gene ID Os02g0732500
Gene name
Homology with ArabidopsisSimilar to At5g37680: ATARLA1A (ADP-ribosylation factor-like A1A) (HF=2e-58)
Module size 30 genes
NF 0.29
%ile 30.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9299.10.95Os02g0732500AK111722.1-ADP-ribosylation factor-like protein2e-58At5g37680ATARLA1A (ADP-ribosylation factor-like A1A)O.I.H.G.S.X.
0.4863.70.97Os01g0267200AB037152.1-26S proteasome non-ATPase regulatory subunit 14(26S proteasome regulatory subunit rpn11)3e-64At5g2354026S proteasome regulatory subunit, putativeO.I.H.G.S.X.
0.4355.40.97Os03g0402000AK103200.1-Trafficking protein particle complex subunit 3(BET3 homolog)4e-17At5g54750transport protein particle (TRAPP) component Bet3, putativeO.I.H.G.S.X.
0.4253.90.97Os05g0110600AK121048.1-Rab5-interacting family protein6e-3At2g29020Rab5-interacting family proteinO.I.H.G.S.X.
0.3745.00.96Os03g0823700AK061336.1-Ras-related protein Rab11C1e-42At1g07410ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B)O.I.H.G.S.X.
0.3541.70.98Os12g0605400AK068060.1-CROC-1-like protein (Fragment)9e-12At1g23260MMZ1 (MMS ZWEI HOMOLOGUE 1)O.I.H.G.S.X.
0.3440.00.96Os07g0211800AK065682.1-Conserved hypothetical protein5e-3At5g19050unknown proteinO.I.H.G.S.X.
0.3440.00.97Os02g0217600AK060905.1-Protein phosphatase 2A4e-73At1g69960PP2A (SERINE/THREONINE PROTEIN PHOSPHATASE 2A)O.I.H.G.S.X.
0.3338.80.97Os01g0683600AK069481.1-Protein of unknown function DUF786 family protein4e+0At2g32150haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.3236.30.96Os02g0564500AK103450.1--2e-6At5g23550-O.I.H.G.S.X.
0.3134.50.97Os02g0634900AK059769.1-Proteasome subunit alpha type 2 (EC 3.4.25.1) (20Sproteasome alpha subunit B) (20S proteasome subunitalpha-2)2e-59At1g16470PAB1 (PROTEASOME SUBUNIT PAB1)O.I.H.G.S.X.
0.3134.50.96Os03g0209400AK059829.1-Got1-like protein family protein9e-6At5g01430Got1-like family proteinO.I.H.G.S.X.
0.2831.10.96Os02g0596500AK072562.1-Snf7 family protein1e-7At5g09260VPS20.2 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20.2)O.I.H.G.S.X.
0.2727.50.97Os02g0297600AK122023.1-Protein of unknown function DUF707 family protein8e-20At1g67850unknown proteinO.I.H.G.S.X.
0.2727.50.97Os07g0194000AK060910.1-Vesicle-associated membrane protein 721(AtVAMP721) (v-SNARE synaptobrevin 7B) (AtVAMP7B)6e-35At1g04750VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)O.I.H.G.S.X.
0.2727.50.96Os03g0137500AK107864.1-VDAC3.13e+0At5g53700-O.I.H.G.S.X.
0.2727.50.97Os03g0804300AK067295.1-Huntingtin-interacting protein 146e-14At3g60800zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.2625.60.97Os08g0282400AK100935.1-Alpha-SNAP (Fragment)4e-2At3g56190ALPHA-SNAP2 (ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2)O.I.H.G.S.X.
0.2625.60.97Os06g0192600AB033535.1-26S protease regulatory subunit 7 (26S proteasomesubunit 7) (26S proteasome AAA-ATPase subunit RPT1)(Regulatory particle triple-A ATPase subunit 1)9e-180At1g53750RPT1A (REGULATORY PARTICLE TRIPLE-A 1A)O.I.H.G.S.X.
0.2625.60.96Os08g0532900AK105383.1-contains InterPro domain(s): IPR000348, IPR0090382e+0At1g14020unknown proteinO.I.H.G.S.X.
0.2524.10.97Os10g0190000AK064839.1-Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)(Ubiquitin-protein ligase M) (Ubiquitin carrier proteinM) (Nedd8-conjugating enzyme Ubc12)4e-19At2g18600RUB1-conjugating enzyme, putativeO.I.H.G.S.X.
0.2422.40.97Os05g0187000AB026564.1-20S proteasome beta2 subunit1e-23At5g40580PBB2O.I.H.G.S.X.
0.2321.20.97Os03g0243300AB010740.1-26S proteasome non-ATPase regulatory subunit 4(26S proteasome regulatory subunit S5A) (Multiubiquitinchain binding protein)1e-8At4g38630RPN10 (REGULATORY PARTICLE NON-ATPASE 10)O.I.H.G.S.X.
0.2219.40.96Os01g0708600AK111377.1-Transport protein particle (TRAPP) component, Bet3family protein5e-44At5g58030transport protein particle (TRAPP) component Bet3 family proteinO.I.H.G.S.X.
0.2117.90.96Os03g0801600AK069591.1-Vacuolar protein sorting-associated protein 35family protein2e-37At1g75850VPS35B (VPS35 HOMOLOG B)O.I.H.G.S.X.
0.1813.70.97Os03g0695600AB026566.1-Proteasome subunit beta type 2 (EC 3.4.25.1) (20Sproteasome alpha subunit D) (20S proteasome subunitbeta-4)3e-3At3g22630PBD1 (20S PROTEASOME BETA SUBUNIT D1)O.I.H.G.S.X.
0.1712.60.96Os04g06008009632.m04940-Conserved hypothetical protein1e-25At4g27630GTG2 (GPCR-TYPE G PROTEIN 2)O.I.H.G.S.X.
0.1611.30.97Os07g0620300AK099000.1-Clathrin adaptor complex, medium chain familyprotein8e-23At4g24550clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.1510.30.96Os03g0856200AK070146.1-Ku domain containing protein1e-1At1g48050KU80O.I.H.G.S.X.
0.1510.30.96Os01g0639100AK103270.1-Eukaryotic initiation factor 4A-3 (eIF4A-3)(eIF-4A-3)6e-85At3g19760eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.298.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.798.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.098.0GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0825GO:0006886The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.Link to AmiGO
0.0522GO:0006511The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin moiety, or multiple ubiquitin moieties, to the protein.Link to AmiGO
0.0512GO:0007264Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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