Co-expression analysis

Gene ID Os02g0727500
Gene name
Homology with ArabidopsisSimilar to At1g16810: unknown protein (HF=3e-2)
Module size 6 genes
NF 0.51
%ile 67.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3948.30.97Os02g0727500AK121427.1-Conserved hypothetical protein3e-2At1g16810unknown proteinO.I.H.G.S.X.
0.6787.20.97Os08g0160000AK059267.1-Protein of unknown function DUF783 family protein7e-4At5g16790-O.I.H.G.S.X.
0.6079.70.97Os03g0262400AK059989.1-Eukaryotic translation initiation factor 4E type 3(eIF4E type 3) (eIF-4E type 3) (mRNA cap-binding proteintype 3) (Novel cap-binding protein) (nCBP)1e-1At5g18110NCBP (NOVEL CAP-BINDING PROTEIN)O.I.H.G.S.X.
0.4762.30.97Os05g0371200AK109403.2-26S proteasome non-ATPase regulatory subunit 14(26S proteasome regulatory subunit rpn11)6e-41At5g2354026S proteasome regulatory subunit, putativeO.I.H.G.S.X.
0.4660.90.98Os03g0116500AF106844.1--1e-9At3g61140FUS6 (FUSCA 6)O.I.H.G.S.X.
0.4660.90.97Os02g0612300AY278997.1-Nuclear cap binding protein subunit 2 (20 kDanuclear cap binding protein) (NCBP 20 kDa subunit)(CBP20) (NCBP interacting protein 1) (NIP1)1e-20At5g44200CBP20 (CAP-BINDING PROTEIN 20)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.099.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
19.199.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.598.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.298.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage