Co-expression analysis

Gene ID Os02g0700600
Gene name
Homology with ArabidopsisSimilar to At5g45430: protein kinase, putative (HF=4e-9)
Module size 8 genes
NF 0.36
%ile 41.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5269.60.95Os02g0700600AK100966.1-GAMYB-binding protein4e-9At5g45430protein kinase, putativeO.I.H.G.S.X.
0.5371.30.96Os07g0690400AK068590.1-Protein phosphatase 2C-like3e-28At1g68410protein phosphatase 2C-related / PP2C-relatedO.I.H.G.S.X.
0.4253.90.96Os10g0519600AK061924.1-Protein of unknown function DUF791 family protein8e-32At3g49310-O.I.H.G.S.X.
0.4051.10.95Os10g0116900AK121038.1-Conserved hypothetical protein5e-6At2g48080oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.3846.90.96Os05g0465100AK065821.1-RabGAP/TBC domain containing protein4e-38At3g55020RabGAP/TBC domain-containing proteinO.I.H.G.S.X.
0.3032.70.95Os03g0246800AK070145.1-Guanine nucleotide exchange factor-like protein1e-39At3g60860guanine nucleotide exchange family proteinO.I.H.G.S.X.
0.2625.60.96Os12g0238100AK064983.1-Exocyst complex component Sec10 family protein6e-40At5g12370SEC10 (EXOCYST COMPLEX COMPONENT SEC10)O.I.H.G.S.X.
0.1611.30.96Os04g0599900AK121748.1-ENTH1 protein (Fragment)2e-5At5g11710epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.298.7GSM116399Seedling_IAA treated_rep1GSE5167Rice seedling hormone treatmentLink to GEO
12.098.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM359922Pokkali root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stressLink to GEO
9.497.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage