Co-expression analysis

Gene ID Os02g0680600
Gene name
Homology with ArabidopsisSimilar to At1g63970: ISPF (HF=9e-3)
Module size 30 genes
NF 0.38
%ile 44.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.92Os02g0680600AK060238.1-2-C-methyl-D-erythritol 2,4-cyclodiphosphatesynthase, chloroplast precursor (EC 4.6.1.12) (MECPS)(MECDP-synthase)9e-3At1g63970ISPFO.I.H.G.S.X.
0.6281.50.94Os02g0529400AK121301.1-Plant neutral invertase family protein3e-38At5g22510beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeO.I.H.G.S.X.
0.5676.30.94Os02g0649700AK069509.1-Peptidase M41, FtsH extracellular domaincontaining protein6e-34At3g47060ftsh7 (FtsH protease 7)O.I.H.G.S.X.
0.4964.40.93Os05g0137300AK067812.1-Conserved hypothetical protein7e-1At5g62100ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)O.I.H.G.S.X.
0.4863.70.93Os09g0133600AK104742.1-Fibrillin-like protein1e-4At4g04020FIB (FIBRILLIN)O.I.H.G.S.X.
0.4863.70.94Os02g0603800AK120769.1-Isoprenoid biosynthesis-like protein (Fragment)6e-86At5g60600HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)O.I.H.G.S.X.
0.4660.90.94Os02g0634500AK065162.1-ATP-dependent Clp protease, proteolytic subunitClpP (EC 3.4.21.92)2e-3At5g23140NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7)O.I.H.G.S.X.
0.4558.80.93Os06g0133800AK105053.1-The start codon is not identified.1e-49At2g45290transketolase, putativeO.I.H.G.S.X.
0.4458.10.93Os05g0215600AK066642.1-Conserved hypothetical protein1e-8At2g46220unknown proteinO.I.H.G.S.X.
0.4458.10.94Os01g0830000AK121100.1-SufB7e-5At4g04770ATABC1 (ATP BINDING CASSETTE PROTEIN 1)O.I.H.G.S.X.
0.4253.90.94Os08g0269800AK120307.1-Leucine-rich repeat, cysteine-containingcontaining protein2e+0At4g39260GR-RBP8O.I.H.G.S.X.
0.4253.90.93Os06g0724400AK099961.1-DNL zinc finger domain containing protein2e+0At5g27280zinc finger (DNL type) family proteinO.I.H.G.S.X.
0.4152.40.94Os03g0428800AK060233.1-TPR-like domain containing protein2e-4At3g26580-O.I.H.G.S.X.
0.4051.10.94Os03g0738400AK119226.1-Serine hydroxymethyltransferase, mitochondrialprecursor (EC 2.1.2.1) (Serine methylase) (Glycinehydroxymethyltransferase) (SHMT)6e-110At4g37930SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1)O.I.H.G.S.X.
0.3846.90.93Os01g0662600AK119723.1-ISCU11e-4At3g01020ISU2 (ISCU-LIKE 2)O.I.H.G.S.X.
0.3745.00.94Os05g0170800AK068085.1-Protein of unknown function DUF525 family protein2e-1At3g01516unknown proteinO.I.H.G.S.X.
0.3745.00.94Os09g0516600AK103563.1-Glyoxalase II2e-7At1g06130GLX2-4 (glyoxalase 2-4)O.I.H.G.S.X.
0.3644.00.95Os01g0711400AY495085.1-Victorin binding protein3e-75At4g33010AtGLDP1 (Arabidopsis thaliana glycine decarboxylase P-protein 1)O.I.H.G.S.X.
0.3541.70.93Os02g0745700AK103058.1-Sterol desaturase family protein2e-25At1g69640SBH1 (SPHINGOID BASE HYDROXYLASE 1)O.I.H.G.S.X.
0.3440.00.94Os02g0707100AK065585.1-Monodehydroascorbate reductase, seedling isozyme(EC 1.6.5.4) (MDAR seedling) (Ascorbate free radicalreductase seedling) (AFR reductase seedling)6e-5At3g27820MDAR4 (MONODEHYDROASCORBATE REDUCTASE 4)O.I.H.G.S.X.
0.3032.70.95Os03g0731900AK064873.1-Isopentenyl/dimethylallyl diphosphate synthase(Fragment)8e-23At4g34350HDR (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE)O.I.H.G.S.X.
0.3032.70.93Os03g0851200AK059425.1-CAXIP1 protein4e-1At1g59940ARR3 (RESPONSE REGULATOR 3)O.I.H.G.S.X.
0.2931.10.94Os02g0766000AK067075.1-DCL protein, chloroplast precursor (Defectivechloroplasts and leaves protein)6e-7At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedO.I.H.G.S.X.
0.2931.10.94Os02g0506600CB679096-Conserved hypothetical protein4e-1At5g59000zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2831.10.96Os04g0431100AK101973.1-GrpE protein family protein2e-1At3g05290PNC1 (PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1)O.I.H.G.S.X.
0.2831.10.94Os11g0456100AK099562.1-Protein of unknown function DUF760 family protein2e-1At4g13310CYP71A20O.I.H.G.S.X.
0.2625.60.94Os07g0204900AK065213.1-Zeta-carotene desaturase (Fragment)1e-19At3g04870ZDS (ZETA-CAROTENE DESATURASE)O.I.H.G.S.X.
0.2524.10.94Os02g0567100AK066393.1-Thioredoxin-related domain containing protein7e+0At5g28820unknown proteinO.I.H.G.S.X.
0.2422.40.95Os12g0276100AK062912.1-Hypothetical protein2e+0At3g17830DNAJ heat shock family proteinO.I.H.G.S.X.
0.1915.10.94Os01g0151200AK110801.1-Inner membrane protein ALBINO3, chloroplastprecursor. Splice isoform 21e-37At2g28800ALB3 (ALBINO 3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
27.599.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.999.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.298.0GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.798.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1503GO:0016114The chemical reactions and pathways resulting in the formation of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.Link to AmiGO
0.1182GO:0006544The chemical reactions and pathways involving glycine, aminoethanoic acid.Link to AmiGO
0.0651GO:0019288The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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