Co-expression analysis

Gene ID Os02g0673100
Gene name
Homology with ArabidopsisSimilar to At2g27240: unknown protein (HF=2e-3)
Module size 6 genes
NF 0.32
%ile 35.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5676.30.90Os02g0673100AK108963.1-Protein of unknown function UPF0005 family protein2e-3At2g27240unknown proteinO.I.H.G.S.X.
0.6787.20.92Os02g07863009630.m05407-Typical P-type R2R3 Myb protein (Fragment)2e-17At4g37780MYB87 (MYB DOMAIN PROTEIN 87)O.I.H.G.S.X.
0.3948.30.90Os01g0536400NM_193243.1-Isopenicillin N synthase family protein2e+0At3g28950avirulence-responsive protein-related / avirulence induced gene (AIG) protein-relatedO.I.H.G.S.X.
0.3338.80.94Os01g0859500AK101338.1-Ocs-element binding factor 3.23e-4At5g07600oleosin / glycine-rich proteinO.I.H.G.S.X.
0.2016.50.92Os01g06418009629.m04342-AAA ATPase, central region domain containingprotein5e-2At3g55460SCL30O.I.H.G.S.X.
0.116.50.93Os01g0200300AK112091.1-Hypothetical protein1e-13At1g30490PHV (PHAVOLUTA)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
42.299.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.598.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.098.4GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.398.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0911GO:0017000The chemical reactions and pathways resulting in the formation of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage