| Gene ID | Os02g0658500 |
| Gene name | |
| Homology with Arabidopsis | Similar to At5g07670: F-box family protein (HF=5e-1) |
| Module size | 19 genes |
| NF | 0.41 |
| %ile | 49.5 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.73 | 91.1 | 0.95 | Os02g0658500 | AK107591.1 | - | Hypothetical protein | 5e-1 | At5g07670 | F-box family protein | O.I. | H.G. | S.X. | |
| 0.54 | 71.9 | 0.96 | Os01g0655400 | AK069873.1 | - | Hypothetical protein | 1e-1 | At1g27590 | - | O.I. | H.G. | S.X. | |
| 0.52 | 69.6 | 0.97 | Os03g0441000 | AK070997.1 | - | The start codon is not identified. | 7e-15 | At5g43130 | TAF4 (TBP-ASSOCIATED FACTOR 4) | O.I. | H.G. | S.X. | |
| 0.48 | 63.7 | 0.96 | Os02g0776800 | AB042415.1 | - | Replication protein A 70kDa | 3e-17 | At2g06510 | RPA1A (REPLICATION PROTEIN A 1A) | O.I. | H.G. | S.X. | |
| 0.48 | 63.7 | 0.96 | Os09g0134500 | AK074022.1 | - | Trithorax-like protein 1 | 1e-26 | At1g05830 | ATX2 (ARABIDOPSIS TRITHORAX-LIKE PROTEIN 2) | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | 0.96 | Os08g0269000 | AK110860.1 | - | Protein of unknown function DUF593 family protein | 2e-1 | At3g42310 | unknown protein | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | 0.97 | Os01g0668300 | AK102266.1 | - | Hypothetical protein | 4e-1 | At5g50375 | CPI1 (CYCLOPROPYL ISOMERASE) | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | 0.96 | Os05g0357700 | 9633.m02652 | - | Conserved hypothetical protein | 3e+0 | At5g49170 | unknown protein | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | 0.96 | Os07g0686700 | AK067620.1 | - | RINT-1/TIP-1 family protein | 4e-1 | At3g47700 | MAG2 (maigo2) | O.I. | H.G. | S.X. | |
| 0.40 | 51.1 | 0.96 | Os03g0690600 | AK101402.1 | - | SCARECROW-like protein | 3e-2 | At2g37650 | scarecrow-like transcription factor 9 (SCL9) | O.I. | H.G. | S.X. | |
| 0.39 | 48.3 | 0.96 | Os02g0772500 | AK100349.1 | - | Protein prenyltransferase domain containingprotein | 4e-5 | At3g17740 | unknown protein | O.I. | H.G. | S.X. | |
| 0.39 | 48.3 | 0.96 | Os09g0571500 | AK106610.1 | - | Lipase, class 3 family protein | 8e-1 | At2g42450 | lipase class 3 family protein | O.I. | H.G. | S.X. | |
| 0.39 | 48.3 | 0.96 | Os10g0489200 | AK058561.1 | - | DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotidesynthase [ATP]) | 9e-2 | At2g32840 | proline-rich family protein | O.I. | H.G. | S.X. | |
| 0.39 | 48.3 | 0.95 | Os07g0586000 | C27412 | - | Hypothetical protein | 1e-1 | At5g52360 | ADF10 (ACTIN DEPOLYMERIZING FACTOR 10) | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | 0.96 | Os10g0546200 | CA759033 | - | Conserved hypothetical protein | 2e-3 | At5g04480 | - | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | 0.97 | Os01g0916300 | AK121997.1 | - | PQBP-1 protein (Nuclear protein containing a WWdomain) (Npw38) (JM26 protein) | 2e-24 | At2g41020 | WW domain-containing protein | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | 0.96 | Os01g0269900 | AK068395.1 | - | Actin/actin-like family protein | 2e-2 | At3g33520 | ATARP6 | O.I. | H.G. | S.X. | |
| 0.27 | 27.5 | 0.96 | Os11g0533600 | CB643005 | - | Hypothetical protein | 5e+0 | At4g35570 | HMGB5 (HIGH MOBILITY GROUP B 5) | O.I. | H.G. | S.X. | |
| 0.21 | 17.9 | 0.94 | Os09g0521900 | AK063534.1 | - | Conserved hypothetical protein | 1e+0 | At1g01880 | DNA repair protein, putative | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 21.0 | 99.2 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 14.4 | 98.6 | GSM422676 | Control | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 8.6 | 97.8 | GSM377080 | Genomic DNA - 45 day old leaf sample - mutant g6728 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.6 | 97.8 | GSM377075 | Genomic DNA - 45 day old leaf sample - mutant g650 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.4 | 97.7 | GSM377078 | Genomic DNA - 45 day old leaf sample - mutant g6603 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.3 | 97.7 | GSM377074 | Genomic DNA - 45 day old leaf sample - mutant g282 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.0 | 97.6 | GSM377070 | Genomic DNA - 45 day old leaf sample - mutant d1 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.0 | 97.6 | GSM377085 | Genomic DNA - 45 day old leaf sample - mutant f2045 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.9 | 97.6 | GSM377084 | Genomic DNA - 45 day old leaf sample - mutant f1856 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.5 | 97.5 | GSM377071 | Genomic DNA - 45 day old leaf sample - mutant d256 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.100 | 1 | GO:0009555 | The process whose specific outcome is the progression of the pollen grain over time, from its formation to the mature structure. The process begins with the meiosis of the microsporocyte to form four haploid microspores. The nucleus of each microspore then divides by mitosis to form a two-celled organism, the pollen grain, that contains a tube cell as well as a smaller generative cell. The pollen grain is surrounded by an elaborate cell wall. In some species, the generative cell immediately divides again to give a pair of sperm cells. In most flowering plants, however this division takes place later, in the tube that develops when a pollen grain germinates. |  |
| 0.044 | 1 | GO:0007242 | A series of reactions within the cell that occur as a result of a single trigger reaction or compound. | |
| 0.043 | 1 | GO:0006260 | The process whereby new strands of DNA are synthesized. The template for replication can either be an existing DNA molecule or RNA. | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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