Co-expression analysis

Gene ID Os02g0656600
Gene name
Homology with ArabidopsisSimilar to At4g32800: AP2 domain-containing transcription factor TINY, putative (HF=2e-12)
Module size 40 genes
NF 0.26
%ile 25.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.60.93Os02g0656600AY345232.1-Pathogenesis-related transcriptional factor andERF domain containing protein2e-12At4g32800AP2 domain-containing transcription factor TINY, putativeO.I.H.G.S.X.
0.5068.00.95Os04g03004019632.m02174--4e+0At5g45860Bet v I allergen family proteinO.I.H.G.S.X.
0.4051.10.95Os01g0852000AK064631.1--7e-3At1g54200unknown proteinO.I.H.G.S.X.
0.3948.30.96Os06g0594300AK110986.1-Conserved hypothetical protein8e-1At5g30341unknown proteinO.I.H.G.S.X.
0.3745.00.95Os10g04862009638.m03038--5e-7At2g25520phosphate translocator-relatedO.I.H.G.S.X.
0.3644.00.96Os02g0699900AK069704.1-Bromodomain transcription factor containingprotein6e-1At5g63905unknown proteinO.I.H.G.S.X.
0.3644.00.96Os11g04814509637.m02007--3e-1At2g07640D2,D4-dienoyl-CoA reductase-relatedO.I.H.G.S.X.
0.3541.70.96Os01g05887509629.m03877--1e-33At1g17130cell cycle control protein-relatedO.I.H.G.S.X.
0.3541.70.94Os06g01488009634.m00482-Cyclin-like F-box domain containing protein6e-1At3g17670bindingO.I.H.G.S.X.
0.3338.80.95Os10g0468600AK110660.1-Hypothetical protein2e+0At2g02835-O.I.H.G.S.X.
0.3236.30.96Os12g0609000CB617733-Resistance protein candidate (Fragment)2e+0At4g04510protein kinase family proteinO.I.H.G.S.X.
0.3236.30.96Os01g0524400AK111464.1-Hypothetical protein4e-2At2g45930unknown proteinO.I.H.G.S.X.
0.3134.50.95Os10g0154500NM_194918.1-Protein kinase domain containing protein2e+0At3g44380-O.I.H.G.S.X.
0.3032.70.96Os08g04708009636.m03686--6e-4At4g33660unknown proteinO.I.H.G.S.X.
0.3032.70.95Os01g0608000D24997-Protein kinase domain containing protein2e-1At3g08680leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.2931.10.97Os01g0602600NM_192650.1--7e-1At1g04445zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2931.10.95Os02g05753009630.m03491--4e+0At1g15800unknown proteinO.I.H.G.S.X.
0.2831.10.97Os06g02634009634.m01526-Naringenin-chalcone synthase family protein1e-2At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)O.I.H.G.S.X.
0.2831.10.96Os02g0105300AK106891.1-L-lactate dehydrogenase (EC 1.1.1.27) (LDH)3e+0At4g17260L-lactate dehydrogenase, putativeO.I.H.G.S.X.
0.2727.50.95Os05g05001009633.m03949-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein2e+0At3g22560GCN5-related N-acetyltransferase (GNAT) family proteinO.I.H.G.S.X.
0.2625.60.94Os01g0882400AK108538.1--2e+0At4g05070unknown proteinO.I.H.G.S.X.
0.2524.10.96Os12g04285009640.m02290--4e+0At2g32100OFP16 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16)O.I.H.G.S.X.
0.2524.10.95Os01g0252600NM_187867.1-Conserved hypothetical protein6e-3At4g01915unknown proteinO.I.H.G.S.X.
0.2422.40.94Os05g05118009633.m04056-Proteinase inhibitor I4, serpin family protein2e+0At4g24026unknown proteinO.I.H.G.S.X.
0.2422.40.95Os05g0523200AK119973.1-Hypothetical protein1e+0At1g68500unknown proteinO.I.H.G.S.X.
0.2321.20.95Os01g03485009629.m02385--2e+0At2g25605unknown proteinO.I.H.G.S.X.
0.2219.40.96Os03g07820669631.m05583--1e+0At1g04520PDLP2 (PLASMODESMATA-LOCATED PROTEIN 2)O.I.H.G.S.X.
0.2219.40.95Os05g03610009633.m02686-Cytochrome P450 family protein3e+0At5g63150unknown proteinO.I.H.G.S.X.
0.2016.50.93Os01g0248800AK062766.1-Hypothetical protein6e-2At1g11520pliceosome associated protein-relatedO.I.H.G.S.X.
0.2016.50.94Os03g0231000AY554031.1-Hypothetical protein8e-1At3g19580AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN 2)O.I.H.G.S.X.
0.1915.10.95Os01g02787669629.m01705--1e+1At5g47760ATPGLP2 (ARABIDOPSIS THALIANA 2-PHOSPHOGLYCOLATE PHOSPHATASE 2)O.I.H.G.S.X.
0.1813.70.95Os01g0598400AK109846.1-Cyclin-like F-box domain containing protein6e-2At5g66730zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.1813.70.95Os05g0521400AK066592.1-Cyclin-like F-box domain containing protein3e-1At5g50830unknown proteinO.I.H.G.S.X.
0.1813.70.95Os02g0453500AK063216.1-Conserved hypothetical protein3e-2At1g54095unknown proteinO.I.H.G.S.X.
0.1611.30.96Os03g01136009631.m00133--2e+0At4g26840SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1)O.I.H.G.S.X.
0.1510.30.96Os07g0141600AK103156.1-Pre-mRNA processing ribonucleoprotein, bindingregion domain containing protein1e-17At1g60170emb1220 (embryo defective 1220)O.I.H.G.S.X.
0.1510.30.97Os05g01094009633.m00102--3e+0At4g30097unknown proteinO.I.H.G.S.X.
0.149.30.95Os03g02821009631.m01705--3e-1At3g55090ATPase, coupled to transmembrane movement of substancesO.I.H.G.S.X.
0.127.20.96Os10g0402900NM_196399.1--9e-2At4g03410peroxisomal membrane protein-relatedO.I.H.G.S.X.
0.116.50.97Os10g0422700AK109674.1-Hypothetical protein2e-1At1g23040hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
26.799.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.498.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.198.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0121GO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage