Co-expression analysis

Gene ID Os02g0655200
Gene name
Homology with ArabidopsisSimilar to At4g27950: CRF4 (CYTOKININ RESPONSE FACTOR 4) (HF=2e-1)
Module size 6 genes
NF 0.63
%ile 85.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.88Os02g0655200AY339378.1-Ethylene responsive element binding factor3(OsERF3)2e-1At4g27950CRF4 (CYTOKININ RESPONSE FACTOR 4)O.I.H.G.S.X.
0.6079.70.92Os12g0599700AK108003.1-Hypothetical protein3e-1At3g45200unknown proteinO.I.H.G.S.X.
0.6079.70.94Os02g0740900AK108067.1-WD40-like domain containing protein2e-4At1g24130transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.5573.70.94Os12g05526009640.m03552--4e-5At5g49130MATE efflux family proteinO.I.H.G.S.X.
0.5371.30.90Os04g0511400AK072430.1-General substrate transporter family protein7e-8At4g16480INT4 (INOSITOL TRANSPORTER 4)O.I.H.G.S.X.
0.5371.30.93Os02g0683500AK109908.1-DNA-binding protein RAV13e-16At4g01500NGA4 (NGATHA4)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
37.399.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
27.399.6GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.498.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.398.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.798.1GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0431GO:0008643The directed movement of carbohydrate into, out of, within or between cells. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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