Co-expression analysis

Gene ID Os02g0644100
Gene name
Homology with ArabidopsisSimilar to At1g62740: stress-inducible protein, putative (HF=6e-33)
Module size 6 genes
NF 0.06
%ile 4.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.95Os02g0644100AK102431.1-Heat shock protein STI (Stress inducible protein)(GmSTI)6e-33At1g62740stress-inducible protein, putativeO.I.H.G.S.X.
0.6787.20.95Os01g0180800AK059244.1-Heat shock protein Hsp70 family protein1e-25At1g79930HSP91O.I.H.G.S.X.
0.6787.20.95Os08g0464000AK059195.1-Protein of unknown function DUF704 domaincontaining protein1e-5At3g12050Aha1 domain-containing proteinO.I.H.G.S.X.
0.6079.70.96Os08g0525600CB620654-Rof16e-24At3g25230ROF1 (ROTAMASE FKBP 1)O.I.H.G.S.X.
0.021.00.95Os03g0158200CR290189-DEAD/DEAH box helicase, N-terminal domaincontaining protein2e-10At3g53110LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4)O.I.H.G.S.X.
0.010.50.95Os03g0390400AB025187.1-Cytochrome c oxidase subunit 6b (OSJNBa0029H02.1protein) (OSJNBa0067K08.22 protein)7e-37At1g22450COX6B (CYTOCHROME C OXIDASE 6B)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
49.399.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
37.899.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.398.3GSM159219Seed (S5, 21 - 29 dap), biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
11.798.2GSM159220Seed (S5, 21 - 29 dap), biological rep 2GSE6893Expression data for reproductive development in riceLink to GEO
11.398.2GSM159221Seed (S5, 21 - 29 dap), biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
9.998.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2221GO:0006123The transfer of electrons from cytochrome c to oxygen that occurs during oxidative phosphorylation, mediated by the multisubunit enzyme known as complex IV.Link to AmiGO
0.2221GO:0009060The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor.Link to AmiGO
0.0241GO:0006457The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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