Co-expression analysis

Gene ID Os02g0635000
Gene name
Homology with ArabidopsisSimilar to At4g38680: GRP2 (GLYCINE RICH PROTEIN 2) (HF=3e+0)
Module size 17 genes
NF 0.33
%ile 37.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6181.20.90Os02g0635000AK069855.1-Nitrilase 13e+0At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.H.G.S.X.
0.5371.30.94Os04g0602200AK120467.1-Conserved hypothetical protein3e-3At1g31410putrescine-binding periplasmic protein-relatedO.I.H.G.S.X.
0.5168.70.94Os05g0108000AK065542.1-The start codon is not identified.4e-31At5g14460pseudouridine synthase/ transporterO.I.H.G.S.X.
0.4964.40.92Os02g0595100AK065136.1-Glycosyl transferase, family 17 protein2e-21At1g12990glycosyl transferase family 17 proteinO.I.H.G.S.X.
0.4458.10.94Os02g0778200AK065948.1-Isoleucyl-tRNA synthetase, class Ia family protein9e-18At5g49030OVA2 (ovule abortion 2)O.I.H.G.S.X.
0.3644.00.93Os03g0163300AK103418.1-Glutathione reductase (Fragment)2e-8At3g54660GR (GLUTATHIONE REDUCTASE)O.I.H.G.S.X.
0.3644.00.93Os01g0250900AK065179.1-HAD superfamily (subfamily IG) hydrolase,5'-Nucleotidase protein3e-32At5g489605' nucleotidase family proteinO.I.H.G.S.X.
0.3541.70.95Os02g0754700AK066904.1--2e-17At3g46100ATHRS1 (HISTIDYL-TRNA SYNTHETASE 1)O.I.H.G.S.X.
0.3440.00.93Os03g0687200AK067324.1-Hypothetical protein2e-1At1g67035unknown proteinO.I.H.G.S.X.
0.3032.70.93Os04g04755009632.m03795-TPR-like domain containing protein3e-2At5g09320VPS9BO.I.H.G.S.X.
0.3032.70.95Os11g0580800AK059555.1-Bacterial sec-independent translocation proteinmttA/Hcf106 family protein6e-23At5g52440HCF106O.I.H.G.S.X.
0.2931.10.94Os11g0544500AK071982.1-Protein of unknown function UPF0016 family protein1e-21At4g13590unknown proteinO.I.H.G.S.X.
0.2931.10.93Os09g0109800AK059327.1-Conserved hypothetical protein2e-54At3g19490ATNHD1O.I.H.G.S.X.
0.2931.10.95Os07g0485400CB668567-Asparaginyl-tRNA synthetase,chloroplast/mitochondrial precursor (EC 6.1.1.22)(Asparagine--tRNA ligase) (AsnRS)1e-25At4g17300NS1O.I.H.G.S.X.
0.2219.40.94Os08g0483600AK099543.1-Conserved hypothetical protein4e-1At2g27470NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT B11)O.I.H.G.S.X.
0.2117.90.92Os01g0507900AK102473.1-NClpP3 (ATP-dependent Clp protease proteolyticsubunit ClpP3)3e+0At4g35820oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.1813.70.92Os12g0206700AK071313.1-Hypothetical protein4e-1At3g11110zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
26.199.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.299.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.997.6GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.696.9GSM195224Suspension cellGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
4.996.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.496.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1111GO:0006428The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.Link to AmiGO
0.1051GO:0006427The process of coupling histidine to histidyl-tRNA, catalyzed by histidyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.Link to AmiGO
0.0831GO:0006487The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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