Co-expression analysis

Gene ID Os02g0615400
Gene name
Homology with ArabidopsisSimilar to At1g25370: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.06
%ile 4.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3846.90.66Os02g06154009630.m03879-Leucine-rich repeat, plant specific containingprotein2e+0At1g25370unknown proteinO.I.H.G.S.X.
0.1611.30.71Os09g0304800CB681576-Conserved hypothetical protein2e+0At4g35320unknown proteinO.I.H.G.S.X.
0.052.50.69Os09g0380600AK063655.1-Conserved hypothetical protein1e+1At5g67070RALFL34 (ralf-like 34)O.I.H.G.S.X.
0.042.00.74Os09g0354900AK069410.1-Conserved hypothetical protein1e-2At3g50550unknown proteinO.I.H.G.S.X.
0.042.00.73Os07g0541700AK105128.1-Receptor-like protein kinase 55e-4At4g23260ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseO.I.H.G.S.X.
0.031.40.73Os11g0626700AK120168.1-Hypothetical protein1e+1At5g05500pollen Ole e 1 allergen and extensin family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
86.3100.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
84.6100.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.298.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the barley gene, Contig20754_at, orthologous to the query gene, Os02g0615400

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7790.8Contig20754_atAt1g25370--5e+0At5g41960unknown proteinO.I.H.G.S.X.
0.5066.9EBro02_SQ004_C14_atAt1g25370--2e+0At5g66930unknown proteinO.I.H.G.S.X.
0.4458.9Contig8308_atAt1g25370--3e-1At1g66210subtilase family proteinO.I.H.G.S.X.
0.4356.4Contig4263_atAt1g25370--2e-1At1g11650RNA-binding protein 45 (RBP45), putativeO.I.H.G.S.X.
0.3849.5HV12I21u_atAt1g25370--7e-2At3g47860apolipoprotein D-relatedO.I.H.G.S.X.
0.3545.1HVSMEf0011J01r2_atAt1g25370--6e-2At4g38920ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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