Co-expression analysis

Gene ID Os02g0602600
Gene name
Homology with ArabidopsisSimilar to At5g24316: proline-rich family protein (HF=3e+0)
Module size 10 genes
NF 0.42
%ile 51.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.96Os02g06026009630.m03753-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein3e+0At5g24316proline-rich family proteinO.I.H.G.S.X.
0.5777.00.97Os09g0500600AK066999.1-DNA topoisomerase III beta-1 (EC 5.99.1.2). Spliceisoform 21e-19At2g32000DNA topoisomerase family proteinO.I.H.G.S.X.
0.4458.10.97Os05g0487600AK059850.1-Conserved hypothetical protein7e-16Atmg00690-O.I.H.G.S.X.
0.4253.90.97Os07g0534200AK064206.1-Hypothetical protein5e-2At3g20970NFU4O.I.H.G.S.X.
0.4051.10.97Os01g0293200AU030398-Plant specific of unknown function DUF860 familyprotein1e-2At3g63090ubiquitin thiolesteraseO.I.H.G.S.X.
0.3846.90.97Os03g0222800AK063432.1-Hypothetical protein1e+0At2g03030Toll-Interleukin-Resistance (TIR) domain-containing proteinO.I.H.G.S.X.
0.3644.00.97Os09g01102009637.m00069-Protein prenyltransferase domain containingprotein8e-2At1g29710pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.3338.80.97Os01g0659800AK109718.1-C2 domain containing protein4e-2At5g20900JAZ12 (JASMONATE-ZIM-DOMAIN PROTEIN 12)O.I.H.G.S.X.
0.3338.80.97Os07g0667400AK073297.1-SAM (and some other nucleotide) binding motifdomain containing protein1e-2At3g45240GRIK1 (GEMINIVIRUS REP INTERACTING KINASE 1)O.I.H.G.S.X.
0.2321.20.97Os01g0939200AK110814.1-Conserved hypothetical protein3e+0At4g16210ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
53.599.9GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
15.998.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.498.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.098.6GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.898.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.798.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.498.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.398.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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