Co-expression analysis

Gene ID Os02g0578400
Gene name
Homology with ArabidopsisSimilar to At1g14150: oxygen evolving enhancer 3 (PsbQ) family protein (HF=4e-7)
Module size 6 genes
NF 0.68
%ile 90.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.92Os02g05784009630.m03520-Photosystem II oxygen evolving complex proteinPsbQ family protein4e-7At1g14150oxygen evolving enhancer 3 (PsbQ) family proteinO.I.H.G.S.X.
0.7391.10.88Os04g0119000AK120328.1-Conserved hypothetical protein2e+0At3g17710F-box family proteinO.I.H.G.S.X.
0.5676.30.92Os07g0105600AK068377.1-Photosystem II oxygen evolving complex proteinPsbQ family protein1e-1At5g56840DNA-binding family proteinO.I.H.G.S.X.
0.5573.70.92Os10g0533100AK111957.1-Conserved hypothetical protein5e-1At2g40020-O.I.H.G.S.X.
0.5068.00.92Os07g0489800AK068191.1-Ferredoxin domain containing protein5e-1At3g16250NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1)O.I.H.G.S.X.
0.5068.00.95Os01g0676200AK070436.1-Conserved hypothetical protein2e+0At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.299.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
20.299.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.498.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.998.8GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.898.8GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.798.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.498.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.898.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.798.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.598.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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