| Gene ID | Os02g0574100 |
| Gene name | |
| Homology with Arabidopsis | Similar to At5g25940: early nodulin-related (HF=9e-1) |
| Module size | 32 genes |
| NF | 0.42 |
| %ile | 52.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.84 | 96.0 | 0.81 | Os02g0574100 | AK068280.1 | - | General substrate transporter family protein | 9e-1 | At5g25940 | early nodulin-related | O.I. | H.G. | S.X. | |
| 0.62 | 81.5 | 0.91 | Os10g0111300 | CB638003 | - | TGF-beta receptor, type I/II extracellular regionfamily protein | 1e-3 | At1g69860 | proton-dependent oligopeptide transport (POT) family protein | O.I. | H.G. | S.X. | |
| 0.60 | 79.7 | 0.85 | Os07g0628900 | AK111564.1 | - | KI domain interacting kinase 1 | 8e-8 | At4g21390 | B120 | O.I. | H.G. | S.X. | |
| 0.53 | 71.3 | 0.85 | Os06g0476200 | AK065566.1 | - | Phosphoglucomutase precursor (EC 5.4.2.2) | 5e-2 | At1g70820 | phosphoglucomutase, putative / glucose phosphomutase, putative | O.I. | H.G. | S.X. | |
| 0.51 | 68.7 | 0.89 | Os06g0136600 | AK069316.1 | - | Enolase 1 (EC 4.2.1.11) (2-phosphoglyceratedehydratase 1) (2-phospho- D-glycerate hydro-lyase 1) | 9e-47 | At2g36530 | LOS2 | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | 0.89 | Os09g0548400 | AK067622.1 | - | Conserved hypothetical protein | 9e-1 | At3g06540 | GDP dissociation inhibitor family protein / Rab GTPase activator family protein | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | 0.89 | Os01g0221500 | NM_188507.1 | - | - | 6e-9 | At2g46220 | unknown protein | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | 0.93 | Os01g0673800 | AK120641.1 | - | Conserved hypothetical protein | 2e-3 | At2g31040 | ATP synthase protein I -related | O.I. | H.G. | S.X. | |
| 0.49 | 64.4 | 0.90 | Os03g0284900 | AK068146.1 | - | Protein prenyltransferase domain containingprotein | 6e-3 | At5g02830 | pentatricopeptide (PPR) repeat-containing protein | O.I. | H.G. | S.X. | |
| 0.48 | 63.7 | 0.90 | Os03g0586500 | AK068097.1 | - | Conserved hypothetical protein | 2e-1 | At5g22550 | unknown protein | O.I. | H.G. | S.X. | |
| 0.45 | 58.8 | 0.91 | Os01g0660900 | 9629.m04524 | - | Phosphoglycerate/bisphosphoglycerate mutase familyprotein | 5e-7 | At5g62840 | phosphoglycerate/bisphosphoglycerate mutase family protein | O.I. | H.G. | S.X. | |
| 0.43 | 55.4 | 0.89 | Os04g0595100 | AK067781.1 | - | Protein of unknown function DUF760 family protein | 2e-1 | At4g02000 | unknown protein | O.I. | H.G. | S.X. | |
| 0.42 | 53.9 | 0.83 | Os01g0784700 | AY327041.1 | - | Receptor-like kinase | 2e-6 | At4g21380 | ARK3 (A. THALIANA RECEPTOR KINASE 3) | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | 0.87 | Os11g0533100 | AK120240.1 | - | DEAD/DEAH box helicase, N-terminal domaincontaining protein | 2e-15 | At3g02060 | DEAD/DEAH box helicase, putative | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | 0.87 | Os07g0569600 | AK067599.1 | - | Conserved hypothetical protein | 7e-12 | At5g19855 | unknown protein | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | 0.86 | Os05g0589200 | AK068666.1 | - | RNA polymerase, sigma subunit family protein | 3e-1 | At1g19930 | kelch repeat-containing F-box family protein | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | 0.92 | Os04g0514400 | AK108112.1 | - | Peptidoglycan binding-like domain containingprotein | 4e-1 | At5g57070 | hydroxyproline-rich glycoprotein family protein | O.I. | H.G. | S.X. | |
| 0.40 | 51.1 | 0.90 | Os02g0731700 | AK120314.1 | - | CONSTANS-like 1 protein | 1e-6 | At1g68520 | zinc finger (B-box type) family protein | O.I. | H.G. | S.X. | |
| 0.40 | 51.1 | 0.90 | Os08g0483200 | AK068161.1 | - | - | 2e-3 | At2g23320 | WRKY15 | O.I. | H.G. | S.X. | |
| 0.39 | 48.3 | 0.91 | Os01g0920300 | AK067201.1 | - | Conserved hypothetical protein | 3e-7 | At3g27180 | unknown protein | O.I. | H.G. | S.X. | |
| 0.34 | 40.0 | 0.87 | Os03g0856100 | AK067137.1 | - | TPR-like domain containing protein | 1e+0 | At5g46730 | glycine-rich protein | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | 0.87 | Os03g0644400 | AB022783.1 | - | Amino acid permease | 5e-3 | At2g39890 | PROT1 (PROLINE TRANSPORTER 1) | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | 0.89 | Os01g0132800 | AK068422.1 | - | Peptidyl-tRNA hydrolase family protein | 6e-1 | At5g16140 | peptidyl-tRNA hydrolase family protein | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | 0.91 | Os03g0633900 | AK059181.1 | - | Single-strand binding protein/Primosomalreplication protein n family protein | 2e-7 | At1g47720 | OSB1 (Organellar Single-stranded) | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | 0.92 | Os03g0695500 | CB636267 | - | Protein of unknown function DUF1517 family protein | 1e+0 | At1g54520 | unknown protein | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | 0.88 | Os07g0476900 | AK066045.1 | - | Thioredoxin-related domain containing protein | 1e-1 | At1g76080 | CDSP32 (CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD) | O.I. | H.G. | S.X. | |
| 0.30 | 32.7 | 0.88 | Os01g0810100 | AK071916.1 | - | Ribonuclease III domain containing protein | 3e-22 | At4g37510 | ribonuclease III family protein | O.I. | H.G. | S.X. | |
| 0.30 | 32.7 | 0.91 | Os02g0730800 | AK066980.1 | - | - | 1e-8 | At3g20930 | RNA recognition motif (RRM)-containing protein | O.I. | H.G. | S.X. | |
| 0.29 | 31.1 | 0.89 | Os05g0318300 | AK065362.1 | - | Uncharacterised conserved protein UCP005520 familyprotein | 7e-4 | At2g25460 | - | O.I. | H.G. | S.X. | |
| 0.25 | 24.1 | 0.94 | Os07g0548300 | NM_185739.1 | - | CRP1 | 4e-6 | At5g42310 | pentatricopeptide (PPR) repeat-containing protein | O.I. | H.G. | S.X. | |
| 0.24 | 22.4 | 0.93 | Os02g0726600 | AK064213.1 | - | Conserved hypothetical protein | 5e+0 | At5g67060 | HEC1 (HECATE 1) | O.I. | H.G. | S.X. | |
| 0.20 | 16.5 | 0.94 | Os11g0150100 | AK068167.1 | - | Phosphoglycerate/bisphosphoglycerate mutase familyprotein | 6e-2 | At5g22620 | phosphoglycerate/bisphosphoglycerate mutase family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 20.9 | 99.2 | GSM422674 | Musa_DNA_RICE | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 15.9 | 98.7 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 10.3 | 98.1 | GSM377070 | Genomic DNA - 45 day old leaf sample - mutant d1 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 10.1 | 98.0 | GSM377075 | Genomic DNA - 45 day old leaf sample - mutant g650 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 9.6 | 97.9 | GSM422676 | Control | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 9.2 | 97.9 | GSM377078 | Genomic DNA - 45 day old leaf sample - mutant g6603 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 9.1 | 97.9 | GSM377074 | Genomic DNA - 45 day old leaf sample - mutant g282 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.9 | 97.8 | GSM377081 | Genomic DNA - 45 day old leaf sample - mutant g7534 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.7 | 97.8 | GSM377076 | Genomic DNA - 45 day old leaf sample - mutant g6485 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.6 | 97.8 | GSM377084 | Genomic DNA - 45 day old leaf sample - mutant f1856 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.058 | 2 | GO:0006396 | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. |  |
| 0.048 | 1 | GO:0006352 | Any process involved in the assembly of the RNA polymerase complex at the promoter region of a DNA template, resulting in the subsequent synthesis of RNA from that promoter. | |
| 0.047 | 1 | GO:0006298 | A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination. | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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