CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os02g0569700

Gene name
Homology with Arabidopsis Similar to At5g45830: DOG1 (DELAY OF GERMINATION 1) (HF=2e+0)

Module size 6 genes

NF 0.56

%ile 76.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.91 98.9 0.99 Os02g0569700 9630.m03441 - - 2e+0 At5g45830 DOG1 (DELAY OF GERMINATION 1) O.I. H.G. S.X.
0.55 73.7 0.99 Os10g0107200 9638.m00082 - - 2e+0 At1g52480 - O.I. H.G. S.X.
0.44 58.1 0.99 Os11g0671700 9639.m04167 - - 1e-1 At3g13830 F-box family protein O.I. H.G. S.X.
0.43 55.4 0.99 Os11g0485700 9639.m02669 - - 2e+0 At4g23080 unknown protein O.I. H.G. S.X.
0.40 51.1 0.99 Os03g0612800 9631.m04004 - - 1e+0 At3g29305 unknown protein O.I. H.G. S.X.
0.40 51.1 0.99 Os01g0728000 AK106601.1 - Hypothetical protein 2e-1 At3g33187 - O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
26.5 99.5 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
23.9 99.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.4 99.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.5 99.1 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.7 99.1 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.9 99.0 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.8 99.0 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.6 99.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.4 99.0 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.0 98.9 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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