Co-expression analysis

Gene ID Os02g0551600
Gene name
Homology with ArabidopsisSimilar to At4g24026: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.60
%ile 81.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.88Os02g0551600AK063102.1-Conserved hypothetical protein2e+0At4g24026unknown proteinO.I.H.G.S.X.
0.7189.60.88Os01g0183600AK110852.1-Cytochrome P450 family protein2e-1At2g21910CYP96A5O.I.H.G.S.X.
0.5573.70.89Os03g0859900AK072837.1-Protein of unknown function DUF547 domaincontaining protein7e-2At5g55508unknown proteinO.I.H.G.S.X.
0.5068.00.92Os09g0532900AK106873.1-Myb, DNA-binding domain containing protein6e-32At4g22680MYB85 (myb domain protein 85)O.I.H.G.S.X.
0.3846.90.88Os02g0722400AK070030.1-Amino acid transporter c (Fragment)2e-4At5g23810AAP7O.I.H.G.S.X.
0.3644.00.88Os07g0643800AK103858.1-Plant disease resistance response protein familyprotein1e-1At1g01730unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.498.5GSM159173Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
12.798.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.997.6GSM159172Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
7.397.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.396.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.996.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.796.4GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.796.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.696.3GSM159206Inflorescence (P6, 22 - 30 cm), biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0421GO:0006865The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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