Co-expression analysis

Gene ID Os02g0542600
Gene name
Homology with ArabidopsisSimilar to At5g44820: unknown protein (HF=1e-2)
Module size 6 genes
NF 0.69
%ile 91.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.60.98Os02g0542600AK110826.1-Hypothetical protein1e-2At5g44820unknown proteinO.I.H.G.S.X.
0.8094.60.98Os05g0480300AK066012.1-Conserved hypothetical protein7e+0At3g56970BHLH038O.I.H.G.S.X.
0.6181.20.98Os05g02553509633.m01481--1e-1At1g23820SPDS1 (spermidine synthase 1)O.I.H.G.S.X.
0.5573.70.98Os01g0811900NM_191050.1--8e+0At5g01870lipid transfer protein, putativeO.I.H.G.S.X.
0.5573.70.98Os08g01995009636.m00954--3e+0At2g32788-O.I.H.G.S.X.
0.5068.00.98Os02g02936509630.m01825--9e+0At5g6751060S ribosomal protein L26 (RPL26B)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
34.599.8GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
14.898.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.198.4GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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