Co-expression analysis

Gene ID Os02g0537200
Gene name
Homology with ArabidopsisSimilar to At5g24770: VSP2 (VEGETATIVE STORAGE PROTEIN 2) (HF=1e+0)
Module size 6 genes
NF 0.53
%ile 70.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.92Os02g0537200AK102851.1-Cyclin-like F-box domain containing protein1e+0At5g24770VSP2 (VEGETATIVE STORAGE PROTEIN 2)O.I.H.G.S.X.
0.7189.60.94Os02g0290500AK065628.1-Ubiquitin domain containing protein2e-9At1g64460phosphatidylinositol 3- and 4-kinase family proteinO.I.H.G.S.X.
0.4660.90.94Os03g0293400AK058372.1-Aprataxin (Forkhead-associated domainhistidine-triad like protein) (FHA-HIT). Splice isoform 61e-8At5g01310basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.4253.90.93Os03g0762900AK068645.1-Protein of unknown function DUF566 family protein3e-1At4g29800PLP8 (PATATIN-LIKE PROTEIN 8)O.I.H.G.S.X.
0.4051.10.94Os12g0116000AK102691.1-PV723e-23At3g52850VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)O.I.H.G.S.X.
0.3846.90.94Os12g0288600AK064558.1-Hypothetical protein3e-1At5g63350unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
41.399.9GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
14.198.5GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.098.2GSM302914emb6D_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
10.398.1GSM159205Inflorescence (P6, 22 - 30 cm), biological rep 2GSE6893Expression data for reproductive development in riceLink to GEO
9.597.9GSM302915emb6D_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedlingLink to GEO
9.097.8GSM159206Inflorescence (P6, 22 - 30 cm), biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
8.997.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.897.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.997.3GSM159204Inflorescence (P6, 22 - 30 cm), biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
5.496.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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