CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os02g0525400

Gene name
Homology with Arabidopsis Similar to At5g55130: CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5) (HF=1e-5)

Module size 6 genes

NF 0.29

%ile 30.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.83 95.8 0.95 Os02g0525400 AK065368.1 - Molybdenum cofactor synthesis protein 3(Molybdopterin synthase sulfurylase) (MPT synthasesulfurylase) 1e-5 At5g55130 CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5) O.I. H.G. S.X.
0.55 73.7 0.95 Os12g0123100 AK070039.1 - - 3e-9 At1g04590 - O.I. H.G. S.X.
0.27 27.5 0.96 Os01g0867800 AK066622.1 - HnRNP-L/PTB/hephaestus splicing factor familyprotein 8e-1 Atmg00410 - O.I. H.G. S.X.
0.21 17.9 0.95 Os03g0641700 AK120708.1 - Conserved hypothetical protein 3e+0 At5g19480 unknown protein O.I. H.G. S.X.
0.17 12.6 0.95 Os11g0148300 AU077762 - Peptidylprolyl isomerase, FKBP-type domaincontaining protein 3e-1 At2g46990 IAA20 (INDOLE-3-ACETIC ACID INDUCIBLE 20) O.I. H.G. S.X.
0.17 12.6 0.95 Os04g0517300 AK069879.1 - Protein of unknown function DUF647 family protein 1e-27 At2g31190 - O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.5 99.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
15.0 98.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.0 98.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.5 98.3 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.5 98.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.4 98.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.4 98.2 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.3 98.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.7 98.1 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.6 98.1 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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