Co-expression analysis

Gene ID Os02g0503100
Gene name
Homology with ArabidopsisSimilar to At3g45230: hydroxyproline-rich glycoprotein family protein (HF=3e+0)
Module size 6 genes
NF 0.35
%ile 39.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.90Os02g05031009630.m02864-Cytochrome P450 monooxygenase CYP92A13e+0At3g45230hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4458.10.92Os01g0692200AK111036.1-Hypothetical protein2e+0At1g04445zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.4051.10.89Os02g03308009630.m02175-Conserved hypothetical protein4e-1At2g34340unknown proteinO.I.H.G.S.X.
0.3338.80.91Os05g01930009633.m00910--3e-1At3g58470methyltransferase/ nucleic acid bindingO.I.H.G.S.X.
0.3134.50.89Os09g05287009637.m03020-Cytochrome p450 (CYP78A9)6e-7At3g61880CYP78A9 (CYTOCHROME P450 78A9)O.I.H.G.S.X.
0.138.20.89Os01g0271400NM_188059.1-Peptidase S14, ClpP family protein3e-16At4g17040ATP-dependent Clp protease proteolytic subunit, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
31.099.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.498.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.198.0GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage