Co-expression analysis

Gene ID Os02g0497700
Gene name
Homology with ArabidopsisSimilar to At5g60980: nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein (HF=7e-2)
Module size 17 genes
NF 0.42
%ile 52.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7793.10.95Os02g0497700AK066155.1-Ras-GTPase-activating protein SH3-domain bindingprotein-like7e-2At5g60980nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.5978.00.97Os06g0687700AK109357.2-T-complex protein 1, eta subunit (TCP-1-eta)(CCT-eta) (HIV-1 Nef interacting protein)2e-44At3g11830chaperonin, putativeO.I.H.G.S.X.
0.5676.30.97Os03g0619400CB653322-Chaperonin Cpn60 family protein1e-57At5g20890chaperonin, putativeO.I.H.G.S.X.
0.5573.70.97Os06g0538000AK069949.1-Chaperonin Cpn60/TCP-1 family protein5e-83At5g26360chaperonin, putativeO.I.H.G.S.X.
0.5573.70.97Os04g0551800AK121568.1-T-complex protein 1, alpha subunit (TCP-1-alpha)(CCT-alpha)4e-40At3g20050ATTCP-1O.I.H.G.S.X.
0.5471.90.98Os05g0147400AK062146.1-T-complex protein 1, zeta subunit (TCP-1-zeta)(CCT-zeta) (CCT-zeta- 1)6e-67At5g16070chaperonin, putativeO.I.H.G.S.X.
0.5371.30.96Os03g06262009631.m04121-Hypothetical protein3e-1At5g23480DNA bindingO.I.H.G.S.X.
0.5068.00.97Os12g0178100AK061107.1-Thylakoid-bound ascorbate peroxidase (EC1.11.1.11) (Fragment)4e-27At4g08390SAPX (STROMAL ASCORBATE PEROXIDASE)O.I.H.G.S.X.
0.4762.30.96Os04g0372800AK101615.1-Nuclear transport factor 2 domain containingprotein2e-1At3g61260DNA-binding family protein / remorin family proteinO.I.H.G.S.X.
0.4152.40.96Os06g0645400AK101482.1-Isoleucyl-tRNA synthetase, class Ia domaincontaining protein5e-29At4g10320isoleucyl-tRNA synthetase, putative / isoleucine--tRNA ligase, putativeO.I.H.G.S.X.
0.4051.10.96Os02g0332200AK067672.1-T-complex protein 1 delta subunit2e-29At3g18190chaperonin, putativeO.I.H.G.S.X.
0.3846.90.97Os05g0301500AK067027.1-Ribophorin I (Fragment)7e-5At1g76400ribophorin I family proteinO.I.H.G.S.X.
0.3541.70.96Os01g0723200AK063794.1-40S ribosomal protein S19-like3e-11At3g0492040S ribosomal protein S24 (RPS24A)O.I.H.G.S.X.
0.3338.80.96Os08g0308100AK122060.1-TGF-beta receptor-interacting protein 12e-38At2g46280TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.3236.30.96Os01g0511300AK069825.1-Proteasome component region PCI domain containingprotein2e-13At4g1900626S proteasome regulatory subunit, putative (RPN9)O.I.H.G.S.X.
0.3032.70.96Os01g0708100AK101457.1-N-myristoyltransferase 1(N-myristoyltransferase-like protein)7e-14At5g57020NMT1 (MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE)O.I.H.G.S.X.
0.2524.10.96Os08g0207000AK058705.1-40S ribosomal protein S11 (S18) (YS12) (RP41)4e-60At3g48930EMB1080 (embryo defective 1080)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.599.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.798.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.498.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.398.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.398.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.398.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1602GO:0006606The directed movement of a protein from the cytoplasm to the nucleus.Link to AmiGO
0.0653GO:0006457The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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