| Gene ID | Os02g0301000 |
| Gene name | |
| Homology with Arabidopsis | Similar to At1g01350: nucleic acid binding / protein binding / zinc ion binding (HF=7e-8) |
| Module size | 14 genes |
| NF | 0.46 |
| %ile | 59.1 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.81 | 94.8 | 0.97 | Os02g0301000 | AK063049.1 | - | Zn-finger, C-x8-C-x5-C-x3-H type domain containingprotein | 7e-8 | At1g01350 | nucleic acid binding / protein binding / zinc ion binding | O.I. | H.G. | S.X. | |
| 0.65 | 83.8 | 0.96 | Os11g0584100 | AK069971.1 | - | Cyclin-like F-box domain containing protein | 2e+1 | At5g32597 | unknown protein | O.I. | H.G. | S.X. | |
| 0.64 | 83.4 | 0.96 | Os08g0412100 | AK072641.1 | - | Disease resistance protein family protein | 2e+0 | At2g28440 | proline-rich family protein | O.I. | H.G. | S.X. | |
| 0.59 | 78.0 | 0.96 | Os04g0564500 | 9632.m04607 | - | Protein of unknown function DUF833 family protein | 2e-3 | At4g38260 | unknown protein | O.I. | H.G. | S.X. | |
| 0.52 | 69.6 | 0.97 | Os10g0135300 | AK072221.1 | - | Cyclin-like F-box domain containing protein | 2e-2 | At2g21060 | ATGRP2B (GLYCINE-RICH PROTEIN 2B) | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | 0.97 | Os03g0782900 | AK108367.1 | - | TPR-like domain containing protein | 1e+0 | At5g14080 | pentatricopeptide (PPR) repeat-containing protein | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | 0.97 | Os02g0780800 | 9630.m05348 | - | Helicase, C-terminal domain containing protein | 3e-1 | At2g34480 | 60S ribosomal protein L18A (RPL18aB) | O.I. | H.G. | S.X. | |
| 0.48 | 63.7 | 0.97 | Os01g0170100 | BI808778 | - | D111/G-patch domain containing protein | 9e-1 | At1g22180 | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | O.I. | H.G. | S.X. | |
| 0.42 | 53.9 | 0.97 | Os03g0775400 | AK107354.1 | - | TPR-like domain containing protein | 1e+0 | At3g61170 | pentatricopeptide (PPR) repeat-containing protein | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | 0.96 | Os08g0484400 | AK065727.1 | - | Bacterial Fmu (Sun)/eukaryotic nucleolarNOL1/Nop2p domain containing protein | 4e-10 | At2g22400 | NOL1/NOP2/sun family protein | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | 0.97 | Os08g0520400 | AK064309.1 | - | Conserved hypothetical protein | 2e+0 | At5g23940 | EMB3009 (embryo defective 3009) | O.I. | H.G. | S.X. | |
| 0.27 | 27.5 | 0.97 | Os01g0528100 | NM_193162.1 | - | Winged helix DNA-binding domain containing protein | 1e-1 | At4g18940 | cyclic phosphodiesterase, putative | O.I. | H.G. | S.X. | |
| 0.26 | 25.6 | 0.97 | Os07g0613300 | AK106898.1 | - | Exportin-t | 3e-2 | At2g23310 | ATRER1C1 | O.I. | H.G. | S.X. | |
| 0.25 | 24.1 | 0.97 | Os04g0670400 | AK064003.1 | - | Ovarian tumour, otubain domain containing protein | 4e-3 | At5g67170 | SEC-C motif-containing protein / OTU-like cysteine protease family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 26.5 | 99.5 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 17.8 | 98.9 | GSM422676 | Control | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 10.6 | 98.1 | GSM377070 | Genomic DNA - 45 day old leaf sample - mutant d1 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 9.5 | 97.9 | GSM377081 | Genomic DNA - 45 day old leaf sample - mutant g7534 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.9 | 97.8 | GSM377085 | Genomic DNA - 45 day old leaf sample - mutant f2045 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.2 | 97.7 | GSM377077 | Genomic DNA - 45 day old leaf sample - mutant g6489 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.0 | 97.6 | GSM377082 | Genomic DNA - 45 day old leaf sample - mutant g9799 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.9 | 97.6 | GSM377074 | Genomic DNA - 45 day old leaf sample - mutant g282 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.7 | 97.6 | GSM377078 | Genomic DNA - 45 day old leaf sample - mutant g6603 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.6 | 97.5 | GSM377071 | Genomic DNA - 45 day old leaf sample - mutant d256 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.014 | 1 | GO:0006952 | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. |  |
| 0.012 | 1 | GO:0006915 | A form of programmed cell death that begins when a cell receives internal or external signals that trigger the activity of proteolytic caspases, proceeds through a series of characteristic stages typically including rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), and plasma membrane blebbing (but maintenance of its integrity until the final stages of the process), and ends with the death of the cell. | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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