Co-expression analysis

Gene ID Os02g0258900
Gene name
Homology with ArabidopsisSimilar to At2g31955: CNX2 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2) (HF=2e-23)
Module size 7 genes
NF 0.20
%ile 18.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5573.70.87Os02g0258900AK100565.1-Molybdopterin biosynthesis CNX2 protein(Molybdenum cofactor biosynthesis enzyme CNX2)2e-23At2g31955CNX2 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2)O.I.H.G.S.X.
0.4660.90.89Os07g0160300AK065685.1-Conserved hypothetical protein7e-1At1g32290unknown proteinO.I.H.G.S.X.
0.4458.10.91Os10g0516300CB620164-Electron transfer flavoprotein-ubiquinoneoxidoreductase, mitochondrial precursor (EC 1.5.5.1)(ETF-QO) (ETF-ubiquinone oxidoreductase) (ETFdehydrogenase) (Electron-transferring- flavoproteindehydrogenase). Splice isoform 28e-17At2g43400ETFQO (electron-transfer flavoprotein:ubiquinone oxidoreductase)O.I.H.G.S.X.
0.2727.50.89Os05g0125500CB660386-Isovaleryl-CoA dehydrogenase, mitochondrialprecursor (EC 1.3.99.10) (IVD)1e-26At3g45300IVD (ISOVALERYL-COA-DEHYDROGENASE)O.I.H.G.S.X.
0.127.20.91Os06g0153900AK101884.1-Thiol methyltransferase 24e-2At2g43910thiol methyltransferase, putativeO.I.H.G.S.X.
0.116.50.91Os08g0424200AK060716.1-Methylcrotonyl-CoA carboxylase beta chain,mitochondrial precursor (EC 6.4.1.4)(3-Methylcrotonyl-CoA carboxylase 2) (MCCase betasubunit) (3-methylcrotonyl-CoA:carbon dioxide ligase betasubunit)2e-26At4g34030MCCB (3-METHYLCROTONYL-COA CARBOXYLASE)O.I.H.G.S.X.
0.105.70.89Os09g0449600AK065937.1-Aconitase (EC 4.2.1.3)3e-5At2g05710aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.598.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.398.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1671GO:0006777The chemical reactions and pathways resulting in the formation of the Mo-molybdopterin cofactor, essential for the catalytic activity of some enzymes. The cofactor consists of a mononuclear molybdenum (Mo) ion coordinated by one or two molybdopterin ligands.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage