Co-expression analysis

Gene ID	Os02g0223300
Gene name
Homology with Arabidopsis	Similar to At2g36026: - (HF=2e-1)
Module size	6 genes
NF	0.52
%ile	69.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	94.6	0.88	Os02g0223300	AK068568.1	-	Conserved hypothetical protein	2e-1	At2g36026	-	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.83	95.8	0.89	Os06g0271900	AK069609.1	-	Conserved hypothetical protein	5e-1	At3g17420	GPK1	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.71	89.6	0.89	Os11g0474400	AK067929.1	-	Hypothetical protein	2e+0	At1g75250	ATRL6 (ARABIDOPSIS RAD-LIKE 6)	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.38	46.9	0.90	Os01g0271400	NM_188059.1	-	Peptidase S14, ClpP family protein	3e-16	At4g17040	ATP-dependent Clp protease proteolytic subunit, putative	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.35	41.7	0.90	Os01g0774200	AK120412.1	-	-	8e-1	At1g13430	ST4C (SULFOTRANSFERASE 4C)	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.25	24.1	0.89	Os12g0539700	AK066114.1	-	-	1e+0	At3g29639	-	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
83.8	100.0	GSM422674	Musa_DNA_RICE	GSE16865	Heterologous microarrays for the study of drought stress in Musa
54.4	99.9	GSM422672	Drought	GSE16865	Heterologous microarrays for the study of drought stress in Musa
29.9	99.7	GSM422676	Control	GSE16865	Heterologous microarrays for the study of drought stress in Musa
4.9	96.5	GSM304677	Unstable mutant line (1)	GSE12069	Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
4.2	96.0	GSM431940	Shoot- -Fe-P biological rep2	GSE17245	Transcriptome analysis of iron and phosphorus interaction in rice seedlings
3.9	95.8	GSM431934	Shoot- +Fe+P biological rep2	GSE17245	Transcriptome analysis of iron and phosphorus interaction in rice seedlings
3.8	95.7	GSM431926	Root- +Fe+P biological rep2	GSE17245	Transcriptome analysis of iron and phosphorus interaction in rice seedlings
3.6	95.5	GSM304671	Unstable mutant line	GSE12069	Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
3.6	95.5	GSM431932	Root- -Fe-P biological rep2	GSE17245	Transcriptome analysis of iron and phosphorus interaction in rice seedlings
3.6	95.5	GSM431939	Shoot- -Fe-P biological rep1	GSE17245	Transcriptome analysis of iron and phosphorus interaction in rice seedlings

Biological processes inferred to relate to the module

SF	Genes	GO ID	Process Name	Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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