Co-expression analysis

Gene ID Os02g0209100
Gene name
Homology with ArabidopsisSimilar to At1g52360: coatomer protein complex, subunit beta 2 (beta prime), putative (HF=5e-9)
Module size 15 genes
NF 0.59
%ile 79.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6987.90.96Os02g0209100AK105040.1-Coatomer WD associated region domain containingprotein5e-9At1g52360coatomer protein complex, subunit beta 2 (beta prime), putativeO.I.H.G.S.X.
0.7289.80.98Os03g0112400AK063082.1-AP2 adaptor, appendage domain containing protein5e-2At5g22770alpha-ADR (alpha-adaptin)O.I.H.G.S.X.
0.7189.60.98Os05g0556100AK065908.1-SDL5A1e-43At3g61760ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B)O.I.H.G.S.X.
0.6583.80.97Os03g0265700AK068453.1-SH3 domain containing protein6e-50At2g07360SH3 domain-containing proteinO.I.H.G.S.X.
0.6483.40.98Os03g0227000AK068454.1-Coatomer gamma subunit (Gamma-coat protein)(Gamma-COP)1e-25At4g34450coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putativeO.I.H.G.S.X.
0.6483.40.98Os02g0537900AK070310.1-Vacuolar-type H+-translocating inorganicpyrophosphatase (EC 3.6.1.1)5e-87At1g16780vacuolar-type H+-translocating inorganic pyrophosphatase, putativeO.I.H.G.S.X.
0.6281.50.97Os04g0502200AK066572.1-Conserved hypothetical protein1e-7At5g11040-O.I.H.G.S.X.
0.6181.20.98Os07g0657200AK072927.1-WD40-like domain containing protein3e-8At3g63460WD-40 repeat family proteinO.I.H.G.S.X.
0.5978.00.97Os03g0355600AK068938.1-Adapter-related protein complex 1 beta 1 subunit(Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit)(Clathrin assembly protein complex 1 beta large chain).Splice isoform B0At4g23460beta-adaptin, putativeO.I.H.G.S.X.
0.5877.00.97Os05g0230600AK070398.1-WD40-like domain containing protein1e-7At5g11560catalyticO.I.H.G.S.X.
0.5676.30.98Os02g0690700AU030655-Clathrin adaptor complex, medium chain familyprotein3e+0At1g19770ATPUP14O.I.H.G.S.X.
0.4964.40.98Os02g0297600AK122023.1-Protein of unknown function DUF707 family protein8e-20At1g67850unknown proteinO.I.H.G.S.X.
0.4863.70.97Os12g0104800AK058259.1--2e-138At3g08530clathrin heavy chain, putativeO.I.H.G.S.X.
0.4458.10.97Os01g0253100AK067133.1-Pto kinase interactor 16e-12At4g02010protein kinase family proteinO.I.H.G.S.X.
0.3948.30.97Os04g0129500AK071986.1-Sec23/Sec24 zinc finger domain containing protein7e-31At3g07100protein transport protein Sec24, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.099.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
19.299.0GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
12.098.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.498.1GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0491GO:0015992The directed movement of protons (hydrogen ions) into, out of, within or between cells.Link to AmiGO
0.0191GO:0006886The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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