| Gene ID | Os02g0179300 |
| Gene name | |
| Homology with Arabidopsis | Similar to At1g16190: DNA repair protein RAD23, putative (HF=9e-10) |
| Module size | 6 genes |
| NF | 0.67 |
| %ile | 90.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.77 | 93.1 | 0.97 | Os02g0179300 | AK069065.1 | - | RAD23 protein, isoform II | 9e-10 | At1g16190 | DNA repair protein RAD23, putative | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | 0.97 | Os03g0288600 | AK101532.1 | - | Muscle derived-like protein | 6e-11 | At5g50840 | - | O.I. | H.G. | S.X. | |
| 0.61 | 81.2 | 0.96 | Os12g0541400 | BQ907958 | - | Hypothetical protein | 3e+0 | At5g01300 | phosphatidylethanolamine-binding family protein | O.I. | H.G. | S.X. | |
| 0.60 | 79.7 | 0.97 | Os07g0688800 | AK068462.1 | - | Aldehyde dehydrogenase domain containing protein | 4e-22 | At3g66658 | ALDH22a1 (Aldehyde Dehydrogenase 22a1) | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | 0.97 | Os02g0234800 | AK070679.1 | - | U2 snRNP-specific A' protein | 1e-2 | At1g09760 | U2A' (U2 small nuclear ribonucleoprotein A) | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | 0.97 | Os11g0568500 | AK059656.1 | - | Prefoldin beta-like family protein | 7e-3 | At3g22480 | prefoldin-related KE2 family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 19.7 | 99.1 | GSM422676 | Control | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 14.0 | 98.5 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 12.7 | 98.4 | GSM154937 | Root_tZ-treatment_30min_replicate 2 | GSE6719 | Cytokinin responsive genes in rice | |
| 12.2 | 98.3 | GSM154833 | Root_tZ-treatment_30min_replicate 1 | GSE6719 | Cytokinin responsive genes in rice | |
| 11.7 | 98.2 | GSM154938 | Root_tZ-treatment_30min_replicate 3 | GSE6719 | Cytokinin responsive genes in rice | |
| 9.1 | 97.9 | GSM154944 | Root_tZ-treatment_120min_replicate 3 | GSE6719 | Cytokinin responsive genes in rice | |
| 8.7 | 97.8 | GSM377073 | Genomic DNA - 45 day old leaf sample - mutant d2943 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.5 | 97.7 | GSM377075 | Genomic DNA - 45 day old leaf sample - mutant g650 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.3 | 97.7 | GSM154942 | Root_tZ-treatment_120min_replicate 1 | GSE6719 | Cytokinin responsive genes in rice | |
| 8.2 | 97.7 | GSM377081 | Genomic DNA - 45 day old leaf sample - mutant g7534 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.118 | 1 | GO:0006289 | A DNA repair process in which a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts). |  |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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