CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os02g0165100

Gene name
Homology with Arabidopsis Similar to At2g35620: FEI2 (FEI 2) (HF=2e-4)

Module size 6 genes

NF 0.71

%ile 93.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.83 95.8 0.90 Os02g0165100 AK066645.1 - Protein kinase domain containing protein 2e-4 At2g35620 FEI2 (FEI 2) O.I. H.G. S.X.
0.67 87.2 0.92 Os03g0302200 AK120853.1 - Zn-finger-like, PHD finger domain containingprotein 3e-14 At3g05670 PHD finger family protein O.I. H.G. S.X.
0.67 87.2 0.92 Os03g0285800 AF332873.1 - MAP kinase 1 (MAP kinase MAPK5a) 8e-4 At2g43790 ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6) O.I. H.G. S.X.
0.67 87.2 0.92 Os04g0619400 AK066337.1 - Protein kinase domain containing protein 9e-7 At1g16670 protein kinase family protein O.I. H.G. S.X.
0.60 79.7 0.90 Os07g0545800 AY062209.1 - Chitin-inducible gibberellin-responsive protein 7e-2 At5g48150 PAT1 (phytochrome a signal transduction 1) O.I. H.G. S.X.
0.40 51.1 0.92 Os10g0580900 AK072734.1 - Conserved hypothetical protein 5e-8 At4g25030 unknown protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.9 98.5 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
7.2 97.4 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
5.3 96.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.0 96.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.7 96.4 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.1 96.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.8 95.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.8 95.7 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.6 95.5 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.6 95.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage