Co-expression analysis

Gene ID Os02g0148000
Gene name
Homology with ArabidopsisSimilar to At4g27810: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.40
%ile 48.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.91Os02g0148000AK120401.1-Zinc finger protein1e+0At4g27810unknown proteinO.I.H.G.S.X.
0.4051.10.95Os07g0510100AK066776.1-Methionine aminopeptidase-like protein3e-19At1g13270MAP1C (METHIONINE AMINOPEPTIDASE 1B)O.I.H.G.S.X.
0.3644.00.95Os08g0345400AK065348.1-Conserved hypothetical protein1e-2At2g04360unknown proteinO.I.H.G.S.X.
0.3644.00.95Os01g0618400NM_192814.1-RNA helicase (Fragment)2e-20At5g63630DEAD box RNA helicase, putativeO.I.H.G.S.X.
0.3338.80.93Os06g0116400AK105979.1-High-affinity nickel-transporter family protein2e-1At4g35080high-affinity nickel-transport family proteinO.I.H.G.S.X.
0.2016.50.93Os09g0423300AK099808.1-PPR repeat containing protein7e-6At4g30825pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
28.699.6GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.498.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.698.2GSM377083Genomic DNA - 45 day old leaf sample - mutant g6989GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377079Genomic DNA - 45 day old leaf sample - mutant g6686GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2861GO:0015675The directed movement of nickel (Ni) ions into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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