Co-expression analysis

Gene ID Os02g0139500
Gene name
Homology with ArabidopsisSimilar to At2g07050: CAS1 (cycloartenol synthase 1) (HF=1e-9)
Module size 6 genes
NF 0.27
%ile 27.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.97Os02g0139500AK103080.1-Cycloartenol synthase (EC 5.4.99.8)1e-9At2g07050CAS1 (cycloartenol synthase 1)O.I.H.G.S.X.
0.5068.00.98Os12g06210009640.m04185-Ubiquitin-specific protease 8 (Fragment)3e-26At5g22030UBP8 (UBIQUITIN-SPECIFIC PROTEASE 8)O.I.H.G.S.X.
0.4458.10.98Os08g01138009636.m00118-Conserved hypothetical protein5e-1At5g18970AWPM-19-like membrane family proteinO.I.H.G.S.X.
0.2727.50.97Os06g0709300AK108588.1-Hypothetical protein3e+0At5g55570unknown proteinO.I.H.G.S.X.
0.1712.60.98Os03g01651009631.m00620-TPR-like domain containing protein4e-6At5g01110pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.116.50.98Os10g0488900AK069090.1--2e-2At4g02750pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.598.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.297.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM429985Rice mutant phoenix (pho) panicle rep 2GSE17194Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicleLink to GEO
6.397.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.897.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.596.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.596.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.596.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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