Co-expression analysis

Gene ID Os02g0133100
Gene name
Homology with ArabidopsisSimilar to At2g21520: transporter (HF=1e-18)
Module size 15 genes
NF 0.29
%ile 30.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7692.20.96Os02g0133100AK060180.1-Phosphatidylinositol transfer-like protein III1e-18At2g21520transporterO.I.H.G.S.X.
0.4253.90.97Os12g0407500AK100320.1-Tyrosine specific protein phosphatase and dualspecificity protein phosphatase family protein3e-84At3g19420ATPEN2 (ARABIDOPSIS THALIANA PTEN 2)O.I.H.G.S.X.
0.3846.90.97Os08g0318500AK070862.1-Sec8 exocyst complex component specific domaincontaining protein4e-1At3g10380SEC8 (SUBUNIT OF EXOCYST COMPLEX 8)O.I.H.G.S.X.
0.3644.00.98Os03g0750800AK061386.1-Transcriptional adaptor ADA2b (AT4g16420/dl4235c)9e-11At4g16420ADA2B (HOMOLOG OF YEAST ADA2 2B)O.I.H.G.S.X.
0.3338.80.98Os11g0661400AK063910.1-AAA ATPase, central region domain containingprotein9e-37At1g02890AAA-type ATPase family proteinO.I.H.G.S.X.
0.3338.80.97Os01g0772600AK120893.1-Casein kinase-like protein6e-43At3g03940protein kinase family proteinO.I.H.G.S.X.
0.2931.10.96Os12g0628500AK122063.1-Methionine aminopeptidase-like protein2e-29At3g59990MAP2B (METHIONINE AMINOPEPTIDASE 2B)O.I.H.G.S.X.
0.2831.10.97Os03g0395600AK063311.1-Hypothetical protein4e-1At1g30260-O.I.H.G.S.X.
0.2524.10.97Os09g0281600AK067020.1-SWAP/Surp domain containing protein6e-12At3g52120SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing proteinO.I.H.G.S.X.
0.2422.40.97Os04g0118400AK101166.1-Elongation factor EF-2 (Fragment)0At1g56070LOS1O.I.H.G.S.X.
0.2321.20.97Os04g0129500AK071986.1-Sec23/Sec24 zinc finger domain containing protein7e-31At3g07100protein transport protein Sec24, putativeO.I.H.G.S.X.
0.2219.40.98Os03g0800100NM_185036.1-Cactin1e-22At1g03910-O.I.H.G.S.X.
0.2117.90.97Os10g0470900AK059172.1-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein2e-1At4g31430unknown proteinO.I.H.G.S.X.
0.2117.90.98Os07g0657200AK072927.1-WD40-like domain containing protein3e-8At3g63460WD-40 repeat family proteinO.I.H.G.S.X.
0.1915.10.97Os02g0519900AK100313.1-Elongation factor EF-2 (Fragment)0At1g56070LOS1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.399.0GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
8.797.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.897.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.897.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1181GO:0006904The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, during exocytosis.Link to AmiGO
0.0501GO:0006414The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.Link to AmiGO
0.0451GO:0006813The directed movement of potassium ions (K+) into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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