Co-expression analysis

Gene ID Os02g0131000
Gene name
Homology with ArabidopsisSimilar to At3g50900: unknown protein (HF=5e+0)
Module size 6 genes
NF 0.04
%ile 2.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.86Os02g0131000AK062905.1-Conserved hypothetical protein5e+0At3g50900unknown proteinO.I.H.G.S.X.
0.116.50.93Os04g0600400AK072894.1-Conserved hypothetical protein6e-1At2g35470unknown proteinO.I.H.G.S.X.
0.084.20.94Os03g0266700AK072831.1-Neutrophil cytosol factor 2 family protein4e-3At4g18060clathrin bindingO.I.H.G.S.X.
0.084.20.94Os06g0608600AK061418.1-Conserved hypothetical protein9e-3At5g56020-O.I.H.G.S.X.
0.042.00.94Os05g0364500AK103527.1-Heat shock protein DnaJ family protein1e-9At5g49060DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.010.50.92Os01g0362000AK070658.1-Conserved hypothetical protein8e-2At5g09805IDL3 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.599.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.298.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.898.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.498.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM100446Rice Bala 1ppm Arsenate Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenateLink to GEO
13.298.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0241GO:0006457The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.Link to AmiGO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.204994.1.S1_s_at, orthologous to the query gene, Os02g0131000

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8397.0PtpAffx.204994.1.S1_s_atAt3g50900hypothetical protein-3e-1At2g46200unknown proteinO.I.H.G.S.X.
0.4067.0PtpAffx.157387.1.S1_atAt3g50900hypothetical protein-3e-2At1g79420unknown proteinO.I.H.G.S.X.
0.3357.5PtpAffx.222336.1.S1_s_atAt3g50900hypothetical protein-2e-11At4g28370protein binding / zinc ion bindingO.I.H.G.S.X.
0.2543.6PtpAffx.155150.1.S1_atAt3g50900hypothetical protein-6e-3At4g10840kinesin light chain-relatedO.I.H.G.S.X.
0.2034.6PtpAffx.9498.1.A1_atAt3g50900--9e-16At1g77420hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.0914.6Ptp.812.1.S1_s_atAt3g50900aquaporin, MIP family, PIP subfamily-4e-61At4g35100PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Triticum_aestivum
Vitis_vinifera
Zea_mays



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