Co-expression analysis

Gene ID Os02g0126700
Gene name
Homology with ArabidopsisSimilar to At2g18740: small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative (HF=2e-11)
Module size 6 genes
NF 0.61
%ile 83.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.10.97Os02g0126700AK063621.1-Small nuclear ribonucleoprotein E (snRNP-E) (Smprotein E) (Sm-E) (SmE)2e-11At2g18740small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putativeO.I.H.G.S.X.
0.8395.80.97Os08g0137200AK065561.1-Actin/actin-like family protein3e-10At1g18450ATARP4O.I.H.G.S.X.
0.7391.10.97Os11g0244800AK103215.1-Alfin-13e-15At1g14510AL7 (ALFIN-LIKE 7)O.I.H.G.S.X.
0.6787.20.98Os01g0837500AK105439.1-RuvB-like 1 (EC 3.6.1.-) (49-kDa TATA box-bindingprotein-interacting protein) (49 kDa TBP-interactingprotein) (TIP49a) (Pontin 52) (Nuclear matrix protein238) (NMP 238) (54 kDa erythrocyte cytosolic protein)(ECP-54) (TIP60-associated protein 54-alpha)(TAP54-alpha)4e-58At5g22330RIN1 (RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1)O.I.H.G.S.X.
0.6181.20.97Os02g0208200AK067315.1-Hypothetical protein5e-1At1g3385040S ribosomal protein S15, putativeO.I.H.G.S.X.
0.2727.50.98Os03g0858100AK100745.1-CRM1 protein (Fragment)6e-47At5g17020XPO1AO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.098.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
4.496.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.296.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.196.0GSM159183Y Leaf, biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
4.196.0GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.196.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.196.0GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.095.9GSM159184Y Leaf, biological rep 2GSE6893Expression data for reproductive development in riceLink to GEO
3.995.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.695.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1001GO:0006397Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.Link to AmiGO
0.0871GO:0008380The process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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