Co-expression analysis

Gene ID Os02g0123400
Gene name
Homology with ArabidopsisSimilar to At1g73970: unknown protein (HF=1e+0)
Module size 14 genes
NF 0.40
%ile 48.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6281.50.94Os02g01234009630.m00227-Conserved hypothetical protein1e+0At1g73970unknown proteinO.I.H.G.S.X.
0.5573.70.96Os03g0268200AK069243.1-Protein kinase domain containing protein3e-1At2g37840protein kinase family proteinO.I.H.G.S.X.
0.5168.70.96Os05g0180600AK111532.1-Phosphatidylinositol 3-kinase, root isoform (EC2.7.1.137) (PI3- kinase) (PtdIns-3-kinase) (PI3K)(SPI3K-5)3e-45At1g60490ATVPS34O.I.H.G.S.X.
0.4863.70.96Os07g0690300AK099674.1-Zn-finger, RING domain containing protein5e-10At3g05670PHD finger family proteinO.I.H.G.S.X.
0.4660.90.96Os07g0626900AK063254.1-Zn-finger, RING domain containing protein1e-13At2g22010RKP (Related to KPC1)O.I.H.G.S.X.
0.3948.30.95Os06g0166100AK066174.1-FAR1 domain containing protein7e-3At5g04510PDK1 (3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1)O.I.H.G.S.X.
0.3948.30.96Os08g0430000AK068194.1-Conserved hypothetical protein2e-1At1g12630DNA binding / transcription activator/ transcription factorO.I.H.G.S.X.
0.3846.90.96Os04g0488000AK111619.1-PITSLRE serine/threonine-protein kinase CDC2L1 (EC2.7.1.37) (Galactosyltransferase associated proteinkinase p58/GTA) (Cell division cycle 2-like 1)2e-71At1g67580protein kinase family proteinO.I.H.G.S.X.
0.3236.30.96Os02g0714000AK067428.1-RGP-3 (Fragment)3e-1At1g22910RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3134.50.96Os07g0461600AK121366.1-TA7 protein (Fragment)1e+0At2g19890unknown proteinO.I.H.G.S.X.
0.3032.70.96Os09g0514900AK102371.1-Protein of unknown function DUF654 family protein2e-2At2g46900-O.I.H.G.S.X.
0.2931.10.97Os02g0137500CB636214-HAC4 (Fragment)2e-12At1g79000HAC1 (HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1)O.I.H.G.S.X.
0.2831.10.95Os06g0622300AK064549.1-AT-rich interaction region domain containingprotein3e-3At1g76510ARID/BRIGHT DNA-binding domain-containing proteinO.I.H.G.S.X.
0.2321.20.95Os07g0647800AK111992.1-Conserved hypothetical protein2e-7At1g63900zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.799.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.498.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.598.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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