Co-expression analysis

Gene ID Os01g0976800
Gene name
Homology with ArabidopsisSimilar to At3g06740: zinc finger (GATA type) family protein (HF=2e-4)
Module size 7 genes
NF 0.34
%ile 38.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7391.10.91Os01g0976800NM_189506.1-Conserved hypothetical protein2e-4At3g06740zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.3644.00.94Os06g0595900AK066655.1-The start codon is not identified.3e-2At5g11430zinc ion bindingO.I.H.G.S.X.
0.3338.80.94Os03g07503009631.m05296-Hypothetical protein2e-16At3g44050kinesin motor protein-relatedO.I.H.G.S.X.
0.2931.10.92Os07g06177009635.m04266-Viral coat and capsid protein family protein2e+0At5g22360ATVAMP714 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 714)O.I.H.G.S.X.
0.2931.10.94Os08g01907009636.m00872-Conserved hypothetical protein3e-10At3g20350unknown proteinO.I.H.G.S.X.
0.2321.20.93Os09g04076009637.m02072-DNA mismatch repair protein MutS, C-terminaldomain containing protein4e-17At4g02070MSH6 (MUTS HOMOLOG 6)O.I.H.G.S.X.
0.2321.20.93Os07g06286009635.m04365-Origin recognition complex subunit 6 familyprotein3e-2At1g26840ORC6 (ORIGIN RECOGNITION COMPLEX PROTEIN 6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
68.299.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
35.199.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
3.995.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.695.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.395.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.294.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.194.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.094.6GSM359912IR29 root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stressLink to GEO
2.794.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
2.693.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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