Co-expression analysis

Gene ID Os01g0974200
Gene name
Homology with ArabidopsisSimilar to At3g09390: MT2A (METALLOTHIONEIN 2A) (HF=2e-2)
Module size 35 genes
NF 0.31
%ile 34.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.99100.00.90Os01g0974200AF017365.1-RicMT (Metallothionein-like protein)2e-2At3g09390MT2A (METALLOTHIONEIN 2A)O.I.H.G.S.X.
0.4762.30.95Os04g0559700AK058323.1-HvPIP1;5 protein2e-35At1g01620PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)O.I.H.G.S.X.
0.4152.40.95Os04g0533300AK061351.1-Remorin (pp34)5e-4At5g23750remorin family proteinO.I.H.G.S.X.
0.3948.30.93Os02g0666200AF022737.1-Aquaporin3e-18At1g01620PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)O.I.H.G.S.X.
0.3948.30.96Os05g0135700BM422069-S-adenosylmethionine synthetase 1 (EC 2.5.1.6)(Methionine adenosyltransferase 1) (AdoMet synthetase 1)1e-8At1g02500SAM1 (S-ADENOSYLMETHIONINE SYNTHETASE 1)O.I.H.G.S.X.
0.3846.90.93Os01g0784800AK059820.1-Minor allergen4e-14At5g54500FQR1 (FLAVODOXIN-LIKE QUINONE REDUCTASE 1)O.I.H.G.S.X.
0.3846.90.94Os11g0147800AK102998.1-Wali7 protein (Fragment)4e-1At1g14620DECOY (DECOY)O.I.H.G.S.X.
0.3846.90.95Os04g0498600AF067194.1-S- adenosylmethionine decarboxylase beta chain]2e-5At5g15948CPuORF10 (Conserved peptide upstream open reading frame 10)O.I.H.G.S.X.
0.3846.90.93Os03g0815200AK099527.1-Methylenetetrahydrofolate reductase (EC 1.5.1.20)3e-44At2g44160MTHFR2 (METHYLENETETRAHYDROFOLATE REDUCTASE 2)O.I.H.G.S.X.
0.3846.90.95Os07g0694700AB050724.1-Ascorbate peroxidase (EC 1.11.1.11)4e-25At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.3644.00.96Os01g0813400AK065370.1-ADP-ribosylation factor2e-96At2g47170ARF1A1CO.I.H.G.S.X.
0.3541.70.96Os02g0760300CB682356-Immunophilin2e-8At5g64350FKBP12 (FK506-BINDING PROTEIN)O.I.H.G.S.X.
0.3541.70.95Os01g0764000AK059818.1-Glutathione S-transferase II1e-1At5g42680unknown proteinO.I.H.G.S.X.
0.3338.80.93Os04g0485300AY078072.1-Glucose-6-phosphate dehydrogenase1e-36At3g27300G6PD5 (glucose-6-phosphate dehydrogenase 5)O.I.H.G.S.X.
0.3236.30.97Os11g0425600AK121882.1-Four F5 protein family protein5e+0At5g42040RPN12b (Regulatory Particle Non-ATPase 12b)O.I.H.G.S.X.
0.3236.30.95Os03g0146100AK104123.1-Tonoplast intrinsic protein (Tonoplast waterchannel)2e-28At3g26520TIP2 (TONOPLAST INTRINSIC PROTEIN 2)O.I.H.G.S.X.
0.3134.50.93Os06g0175500AK058599.1-Epsin, N-terminal domain containing protein8e-11At5g35200epsin N-terminal homology (ENTH) domain-containing proteinO.I.H.G.S.X.
0.3032.70.96Os02g0121300L29470.1-Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8)(PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-bindingprotein)9e-12At4g38740ROC1 (ROTAMASE CYP 1)O.I.H.G.S.X.
0.3032.70.97Os05g0402300AK070043.1-Protein of unknown function UPF0005 family protein9e-3At4g15470-O.I.H.G.S.X.
0.2931.10.94Os06g0644200D45383.1-Vacuolar H+-pyrophosphatase (EC 3.6.1.1)9e-175At1g15690AVP1O.I.H.G.S.X.
0.2931.10.94Os01g0550300AK106151.1-Conserved hypothetical protein2e-22At3g06720IMPA-1 (IMPORTIN ALPHA ISOFORM 1)O.I.H.G.S.X.
0.2931.10.95Os12g0623900AK099069.1-Ethylene-responsive methionine synthase (Fragment)0At5g17920ATMS1O.I.H.G.S.X.
0.2931.10.95Os01g0675100AF203879.1-Peroxiredoxin4e-1At1g65970TPX2 (thioredoxin-dependent peroxidase 2)O.I.H.G.S.X.
0.2831.10.96Os02g0792900AK068367.1-TMS membrane protein/tumour differentiallyexpressed protein family protein1e-15At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinO.I.H.G.S.X.
0.2625.60.88Os11g0167800AF039573.1-Anth (Pollen-specific desiccation-associated LLA23protein)1e-1At1g62060unknown proteinO.I.H.G.S.X.
0.2625.60.95Os08g0191700AK066092.1-Glyoxalase I family protein2e-13At1g11840ATGLX1 (GLYOXALASE I HOMOLOG)O.I.H.G.S.X.
0.2524.10.96Os08g0126300AK105038.1-Glyceraldehyde-3-phosphate dehydrogenase(Fragment)6e-23At1g13440GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)O.I.H.G.S.X.
0.2524.10.97Os07g0512200CF292921-Symbiosis-related like protein2e-40At4g21980APG8A (AUTOPHAGY 8A)O.I.H.G.S.X.
0.2524.10.96Os09g0394900AK061821.1-Annexin-like protein3e+0At5g23640unknown proteinO.I.H.G.S.X.
0.2422.40.97Os06g0152100AK121519.1-Profilin 28e-15At2g19760PRF1 (PROFILIN 1)O.I.H.G.S.X.
0.2321.20.92Os07g0424400AK120236.1-Cellulose synthase-71e-51At2g21770CESA9 (CELLULOSE SYNTHASE A9)O.I.H.G.S.X.
0.2219.40.95Os12g0624000AK067726.1-Ethylene-responsive methionine synthase (Fragment)0At5g17920ATMS1O.I.H.G.S.X.
0.1813.70.96Os05g0489600D17760.1-NTGB1 (Fragment)1e-73At1g10630ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F)O.I.H.G.S.X.
0.1611.30.95Os07g0549700AK104331.1-ARM repeat fold domain containing protein1e-12At3g42050vacuolar ATP synthase subunit H family proteinO.I.H.G.S.X.
0.138.20.96Os10g0478200AK104691.1-Cytosolic malate dehydrogenase (EC 1.1.1.37)8e-44At5g43330malate dehydrogenase, cytosolic, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.998.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.098.3GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
8.397.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.897.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0662GO:0015992The directed movement of protons (hydrogen ions) into, out of, within or between cells.Link to AmiGO
0.0561GO:0006555The chemical reactions and pathways involving methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.Link to AmiGO
0.0531GO:0030036A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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