Co-expression analysis

Gene ID Os01g0968300
Gene name
Homology with ArabidopsisSimilar to At3g19430: late embryogenesis abundant protein-related / LEA protein-related (HF=2e-1)
Module size 8 genes
NF 0.45
%ile 57.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5676.30.85Os01g0968300AK122054.1-Root cap family protein2e-1At3g19430late embryogenesis abundant protein-related / LEA protein-relatedO.I.H.G.S.X.
0.6787.20.89Os02g0706900AK059034.1-Alpha/beta hydrolase family protein1e-2At4g36610hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.5676.30.87Os05g0280500AK111471.1-Phospholipid/glycerol acyltransferase familyprotein2e-8At2g38110GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6)O.I.H.G.S.X.
0.4355.40.90Os10g0193100CA755860-Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein1e+0At2g22800HAT9O.I.H.G.S.X.
0.4051.10.89Os08g0245200AK069932.1-4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)(4-coumaroyl-CoA synthase 1)3e-10At3g212404CL2 (4-COUMARATE:COA LIGASE 2)O.I.H.G.S.X.
0.3644.00.87Os10g0532600AK060309.1-Uncharacterized plant-specific domain containingprotein6e-1At1g48750protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3541.70.87Os09g02935009637.m00942-BRASSINOSTEROID INSENSITIVE 1 precursor (EC2.7.1.37) (AtBRI1) (Brassinosteroid LRR receptor kinase)9e-15At3g13380BRL3 (BRI1-LIKE 3)O.I.H.G.S.X.
0.2831.10.87Os05g0245300AB091471.1-Protein of unknown function DUF588 family protein7e+0Atcg00790-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
42.799.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
24.299.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.898.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.098.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.698.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.598.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.498.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.398.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1821GO:0009826The process by which a cell irreversibly increases in size in one [spatial] dimension or along one axis, resulting in the morphogenesis of the cell.Link to AmiGO
0.1671GO:0009741A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brassinosteroid stimulus.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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