Co-expression analysis

Gene ID Os01g0968200
Gene name
Homology with ArabidopsisSimilar to At3g19430: late embryogenesis abundant protein-related / LEA protein-related (HF=2e+0)
Module size 6 genes
NF 0.25
%ile 24.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4458.10.88Os01g0968200NM_189425.1-Root cap family protein2e+0At3g19430late embryogenesis abundant protein-related / LEA protein-relatedO.I.H.G.S.X.
0.4355.40.85Os12g0431700BX900645-ab initio prediction with EST support5e+0At4g33450MYB69 (MYB DOMAIN PROTEIN 69)O.I.H.G.S.X.
0.3644.00.85Os09g02954009637.m00961--1e+0At4g16610zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2117.90.84Os04g0183300AK100045.1-Amidase family protein1e+0At4g34880amidase family proteinO.I.H.G.S.X.
0.1915.10.85Os11g02702019639.m01552--9e-2At5g25460unknown proteinO.I.H.G.S.X.
0.1712.60.84Os04g01755009632.m00828-Transferase family protein3e+0At2g27180unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
27.199.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
26.499.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.598.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.698.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.298.5GSM159271Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice ColeoptileLink to GEO
13.498.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.098.2GSM154938Root_tZ-treatment_30min_replicate 3GSE6719Cytokinin responsive genes in riceLink to GEO
10.898.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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