Co-expression analysis

Gene ID Os01g0965300
Gene name
Homology with ArabidopsisSimilar to At5g28800: unknown protein (HF=5e+0)
Module size 6 genes
NF 0.03
%ile 2.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.62Os01g0965300AK111057.1-Hypothetical protein5e+0At5g28800unknown proteinO.I.H.G.S.X.
0.5068.00.65Os11g0471200AK066957.1-Conserved hypothetical protein9e-2At1g15430-O.I.H.G.S.X.
0.2219.40.66Os10g01868009638.m00950-Nucleic acid-binding OB-fold domain containingprotein8e+0At5g55940emb2731 (embryo defective 2731)O.I.H.G.S.X.
0.2117.90.69Os01g0750100AK067329.1-WRKY transcription factor 311e-11At3g58710WRKY69O.I.H.G.S.X.
0.010.50.68Os10g0498300AK060338.1-Epoxide hydrolase2e+0At5g59870HTA6O.I.H.G.S.X.
0.010.50.68Os04g0293300AK111082.1-Tropinone reductase-I (EC 1.1.1.206) (TR-I)(Tropine dehydrogenase)3e-1At4g08593unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
31.099.7GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
19.399.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.998.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.498.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377083Genomic DNA - 45 day old leaf sample - mutant g6989GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the grape gene, 1607848_at, orthologous to the query gene, Os01g0965300

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5577.31607848_atAt5g28800hypothetical protein LOC100248102-1e+0At4g295302,3-diketo-5-methylthio-1-phosphopentane phosphatase familyO.I.H.G.S.X.
0.4464.11621517_s_atAt5g28800hypothetical protein LOC100250066-2e-2At1g62760invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.2937.71620413_atAt5g28800--1e+0At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.1515.61615714_atAt5g28800--3e-4At1g07250UGT71C4 (UDP-GLUCOSYL TRANSFERASE 71C4)O.I.H.G.S.X.
0.1414.41614117_atAt5g28800--4e-4At1g61890MATE efflux family proteinO.I.H.G.S.X.
0.077.81615548_atAt5g28800--2e-2At5g26805unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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