Co-expression analysis

Gene ID Os01g0960300
Gene name
Homology with ArabidopsisSimilar to At5g57510: unknown protein (HF=7e+0)
Module size 6 genes
NF 0.72
%ile 94.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.70.95Os01g0960300BI813093-Glucose inhibited division protein A7e+0At5g57510unknown proteinO.I.H.G.S.X.
0.8094.60.96Os08g0407000CB658542-ab initio prediction with EST support8e-6At1g78010tRNA modification GTPase, putativeO.I.H.G.S.X.
0.7793.10.95Os09g0363100AK065958.1-Protein of unknown function UPF0044 family protein4e-4At4g29750RNA bindingO.I.H.G.S.X.
0.6787.20.95Os03g0334100AK120587.1-Hypothetical protein8e-1At3g44755unknown proteinO.I.H.G.S.X.
0.6079.70.95Os05g0519600AK102422.1-4-methyl-5(B-hydroxyethyl)-thiazol monophosphatebiosynthesis enzyme7e-2At5g48953LCR86 (Low-molecular-weight cysteine-rich 86)O.I.H.G.S.X.
0.4458.10.95Os04g0466100AK064543.1-Cell division protein FtsH-like protein3e-7At3g02450cell division protein ftsH, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.399.0GSM304669Control for the stable mutant rice line (1)GSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertionLink to GEO
16.698.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.698.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.098.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM304664Control for the stable mutant rice lineGSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertionLink to GEO
9.597.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.797.8GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage