Co-expression analysis

Gene ID Os01g0959800
Gene name
Homology with ArabidopsisSimilar to At4g25970: PSD3 (phosphatidylserine decarboxylase 3) (HF=1e-9)
Module size 6 genes
NF 0.43
%ile 54.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7793.10.94Os01g0959800CF277981-Phosphatidylserine decarboxylase1e-9At4g25970PSD3 (phosphatidylserine decarboxylase 3)O.I.H.G.S.X.
0.6181.20.94Os04g04519009632.m03567-Protein phosphatase 2C-like domain containingprotein6e-11At1g22280protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.6181.20.94Os03g0639600AK111569.1-Zinc-finger protein Lsd14e-5At4g20380zinc finger protein (LSD1)O.I.H.G.S.X.
0.3846.90.95Os06g0102700AK071080.1-Arm repeat-containing protein1e-6At3g46510PUB13 (PLANT U-BOX 13)O.I.H.G.S.X.
0.3541.70.94Os06g0527100AK099993.1-Cyclic nucleotide-gated channel A (Fragment)2e-5At4g30560ATCNGC9 (CYCLIC NUCLEOTIDE GATED CHANNEL 9)O.I.H.G.S.X.
0.1712.60.94Os03g0124300AK069148.1-Hypothetical protein2e-1At2g23320WRKY15O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
33.199.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
17.698.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.998.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.698.8GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.498.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.398.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.298.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.298.7GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.498.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.398.6GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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