Co-expression analysis

Gene ID Os01g0952500
Gene name
Homology with ArabidopsisSimilar to At3g57040: ARR9 (RESPONSE REGULATOR 9) (HF=9e-7)
Module size 6 genes
NF 0.01
%ile 0.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.80Os01g0952500AK101721.1-Two-component response regulator ARR9 (Responsereactor 4)9e-7At3g57040ARR9 (RESPONSE REGULATOR 9)O.I.H.G.S.X.
0.6787.20.79Os11g0143300AK058585.1--5e-7At3g57040ARR9 (RESPONSE REGULATOR 9)O.I.H.G.S.X.
0.5068.00.82Os04g0673300AK059734.1-ZmRR2 protein (Response regulator 2)8e-3At5g19090heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.010.50.81Os02g0696700AK060255.1-Jumonji domain containing protein 2C (Geneamplified in squamous cell carcinoma 1 protein) (GASC-1protein)3e-13At5g46910transcription factor jumonji (jmj) family proteinO.I.H.G.S.X.
-0.10.79Os09g0327400AK068681.1-Aldose 1-epimerase family protein7e-7At5g66530aldose 1-epimerase family proteinO.I.H.G.S.X.
-0.10.79Os03g0376100AK058961.1-Cys/Met metabolism pyridoxal-phosphate-dependentenzymes family protein2e-4At3g01120MTO1 (METHIONINE OVERACCUMULATION 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.999.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
24.799.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.997.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.097.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.796.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.796.9GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.396.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.4293GO:0009735A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.Link to AmiGO
0.1051GO:0006012The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.Link to AmiGO
0.1003GO:0000160A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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