Co-expression analysis

Gene ID Os01g0940800
Gene name
Homology with ArabidopsisSimilar to At5g20560: beta-1,3-glucanase, putative (HF=1e-5)
Module size 6 genes
NF 0.79
%ile 98.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.77Os01g0940800AK068247.1-Beta-1,3-glucanase precursor1e-5At5g20560beta-1,3-glucanase, putativeO.I.H.G.S.X.
0.8395.80.72Os06g0493100AY256682.1-Hypothetical protein1e+0At5g38950germin-like protein-relatedO.I.H.G.S.X.
0.8094.60.82Os10g0569400AK062449.1-RIR1a protein precursor3e-1At2g29180unknown proteinO.I.H.G.S.X.
0.8094.60.82Os06g0591200AK062563.1-Conserved hypothetical protein1e-1At1g60950FED AO.I.H.G.S.X.
0.7391.10.81Os10g0569600BQ529575-RIR1b protein precursor1e+0At2g25344LCR14 (Low-molecular-weight cysteine-rich 14)O.I.H.G.S.X.
0.4355.40.77Os03g0762400AK071181.1-Peroxidase precursor (EC 1.11.1.7)1e-5At5g67400peroxidase 73 (PER73) (P73) (PRXR11)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.699.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.498.7GSM262021Nipponbare, 11 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthicaLink to GEO
12.498.3GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.098.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM375648Taichung 65_shoot_replicate 2GSE15046Transcriptome analysis of gibberellin-signaling mutants in riceLink to GEO
9.697.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM375647Taichung 65_shoot_replicate 1GSE15046Transcriptome analysis of gibberellin-signaling mutants in riceLink to GEO
9.097.8GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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