Co-expression analysis

Gene ID Os01g0932700
Gene name
Homology with ArabidopsisSimilar to At3g55770: LIM domain-containing protein (HF=7e+0)
Module size 6 genes
NF 0.54
%ile 73.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6079.70.93Os01g0932700AK105157.1-Gamma thionin family protein7e+0At3g55770LIM domain-containing proteinO.I.H.G.S.X.
0.7391.10.91Os12g0427600CA759095-P69F protein9e-1At5g66190FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)O.I.H.G.S.X.
0.6079.70.93Os12g02237009640.m01170-Hypothetical protein2e+0At5g39630vesicle transport v-SNARE family proteinO.I.H.G.S.X.
0.5777.00.86Os01g06510009629.m04423-Lipolytic enzyme, G-D-S-L family protein4e-2At5g03980GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.4458.10.91Os04g02031009632.m01138-Protein of unknown function DUF239 domaincontaining protein4e-1At3g27420unknown proteinO.I.H.G.S.X.
0.2727.50.90Os12g0438100AK108104.1-Hypothetical protein2e-2At3g07220transcriptional activator, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
49.199.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
36.299.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.698.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.097.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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