Co-expression analysis

Gene ID Os01g0930400
Gene name
Homology with ArabidopsisSimilar to At4g13420: HAK5 (HIGH AFFINITY K+ TRANSPORTER 5) (HF=4e-7)
Module size 11 genes
NF 0.62
%ile 84.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6483.40.97Os01g0930400BI812278-K+ potassium transporter family protein4e-7At4g13420HAK5 (HIGH AFFINITY K+ TRANSPORTER 5)O.I.H.G.S.X.
0.8295.00.97Os05g0409300AK065214.1-Cysteine protease inhibitor cystatin (Fragment)2e+0At2g20260PSAE-2 (photosystem I subunit E-2)O.I.H.G.S.X.
0.6987.90.97Os01g0813400AK065370.1-ADP-ribosylation factor2e-96At2g47170ARF1A1CO.I.H.G.S.X.
0.6483.40.97Os07g0114300AK062043.1-Conserved hypothetical protein3e-1At2g23090unknown proteinO.I.H.G.S.X.
0.6483.40.97Os02g0820700AK061365.1-Bet1-like SNARE 1-1 (AtBET11) (Bet1/Sft1-likeSNARE 14a) (AtBS14a)3e-18At3g58170BS14A (BET1P/SFT1P-LIKE PROTEIN 14A)O.I.H.G.S.X.
0.5978.00.97Os01g0254900AK068204.1-Syntaxin1e-5At5g46860VAM3O.I.H.G.S.X.
0.5877.00.97Os08g0191600AK121169.1-Autophagy 8e9e-33At1g62040ATG8C (autophagy 8c)O.I.H.G.S.X.
0.5877.00.98Os08g0366100AK120339.1-EDF-1 protein (HMBF1alpha) (Endothelialdifferentiation-related factor 1, isoform alpha)(Fragment)6e-11At2g42680MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)O.I.H.G.S.X.
0.5777.00.97Os02g0792900AK068367.1-TMS membrane protein/tumour differentiallyexpressed protein family protein1e-15At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinO.I.H.G.S.X.
0.4863.70.97Os11g0425600AK121882.1-Four F5 protein family protein5e+0At5g42040RPN12b (Regulatory Particle Non-ATPase 12b)O.I.H.G.S.X.
0.4762.30.97Os07g0512200CF292921-Symbiosis-related like protein2e-40At4g21980APG8A (AUTOPHAGY 8A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
36.499.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.598.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.198.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0501GO:0006813The directed movement of potassium ions (K+) into, out of, within or between cells.Link to AmiGO
0.0191GO:0006886The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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