Co-expression analysis

Gene ID Os01g0928100
Gene name
Homology with ArabidopsisSimilar to At3g48860: unknown protein (HF=5e-12)
Module size 13 genes
NF 0.57
%ile 78.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6583.80.96Os01g0928100AK120714.1-Conserved hypothetical protein5e-12At3g48860unknown proteinO.I.H.G.S.X.
0.7793.10.98Os03g0355600AK068938.1-Adapter-related protein complex 1 beta 1 subunit(Beta-adaptin 1) (Adaptor protein complex AP-1 beta-1subunit) (Golgi adaptor HA1/AP1 adaptin beta subunit)(Clathrin assembly protein complex 1 beta large chain).Splice isoform B0At4g23460beta-adaptin, putativeO.I.H.G.S.X.
0.7088.40.98Os03g0227000AK068454.1-Coatomer gamma subunit (Gamma-coat protein)(Gamma-COP)1e-25At4g34450coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putativeO.I.H.G.S.X.
0.6483.40.97Os08g0248900AK073613.1-ADP-ribosylation factor 32e-46At2g24765ARF3 (ADP-RIBOSYLATION FACTOR 3)O.I.H.G.S.X.
0.6181.20.97Os06g0618600AK060212.1-Conserved hypothetical protein8e-8At1g50120-O.I.H.G.S.X.
0.6181.20.97Os03g0265700AK068453.1-SH3 domain containing protein6e-50At2g07360SH3 domain-containing proteinO.I.H.G.S.X.
0.5573.70.98Os02g0537900AK070310.1-Vacuolar-type H+-translocating inorganicpyrophosphatase (EC 3.6.1.1)5e-87At1g16780vacuolar-type H+-translocating inorganic pyrophosphatase, putativeO.I.H.G.S.X.
0.5471.90.98Os02g0690700AU030655-Clathrin adaptor complex, medium chain familyprotein3e+0At1g19770ATPUP14O.I.H.G.S.X.
0.5269.60.98Os07g0657200AK072927.1-WD40-like domain containing protein3e-8At3g63460WD-40 repeat family proteinO.I.H.G.S.X.
0.5068.00.98Os05g0556100AK065908.1-SDL5A1e-43At3g61760ADL1B (ARABIDOPSIS DYNAMIN-LIKE 1B)O.I.H.G.S.X.
0.4660.90.97Os02g0832800AK101526.1-Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (EC 2.4.1.101)5e-15At4g38240CGL1 (COMPLEX GLYCAN LESS 1)O.I.H.G.S.X.
0.3644.00.97Os03g0804300AK067295.1-Huntingtin-interacting protein 146e-14At3g60800zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.3644.00.97Os01g0911200AK101333.1-Ribophorin II family protein1e-6At4g21150HAP6 (HAPLESS 6)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.199.3GSM195228EmbryoGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
14.598.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.097.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.396.7GSM195229EndospermGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
3.795.6GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.595.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.595.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.395.1GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.294.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.194.8GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1001GO:0006487The posttranslational glycosylation of protein via the N4 atom of peptidyl-asparagine or the N1' atom peptidyl-tryptophan.Link to AmiGO
0.0571GO:0007186The series of molecular signals generated as a consequence of a G-protein coupled receptor binding to its physiological ligand.Link to AmiGO
0.0511GO:0015992The directed movement of protons (hydrogen ions) into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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