Co-expression analysis

Gene ID Os01g0921400
Gene name
Homology with ArabidopsisSimilar to At5g50380: ATEXO70F1 (exocyst subunit EXO70 family protein F1) (HF=2e-2)
Module size 7 genes
NF 0.27
%ile 26.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.60.96Os01g0921400AK099844.1-Exo70 exocyst complex subunit family protein2e-2At5g50380ATEXO70F1 (exocyst subunit EXO70 family protein F1)O.I.H.G.S.X.
0.6079.70.96Os04g0541500AK121106.1-Diacylglycerol kinase, catalytic region domaincontaining protein7e-6At5g23450ATLCBK1 (A. THALIANA LONG-CHAIN BASE (LCB) KINASE 1)O.I.H.G.S.X.
0.4458.10.96Os07g0274800AK121258.1-B' regulatory subunit of PP2A2e-8At3g26020serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putativeO.I.H.G.S.X.
0.2219.40.97Os05g0301600AK073928.1-Protein phosphatase inhibitor 2 (IPP-2) familyprotein4e-17At5g52200unknown proteinO.I.H.G.S.X.
0.1712.60.96Os12g0514400CB660276-Potyvirus VPg interacting protein (Fragment)9e-3At5g48160OBE2 (OBERON2)O.I.H.G.S.X.
0.1611.30.96Os08g0112500AK104081.1-Cyclin-dependent protein kinase-like protein2e-6At5g44290protein kinase family proteinO.I.H.G.S.X.
0.1510.30.96Os06g0665000AK104873.1-Eukaryotic protein of unknown function DUF284family protein4e-6At1g79450ALIS5 (ALA-Interacting Subunit 5)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.599.0GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.498.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.298.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.198.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0771GO:0006887A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process whereby most molecules are secreted from eukaryotic cells.Link to AmiGO
0.0291GO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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