CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os01g0920400

Gene name
Homology with Arabidopsis Similar to At4g33650: DRP3A (DYNAMIN-RELATED PROTEIN 3A) (HF=1e-13)

Module size 7 genes

NF 0.46

%ile 58.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.63 82.7 0.97 Os01g0920400 AK073965.1 - Dynamin family protein 1e-13 At4g33650 DRP3A (DYNAMIN-RELATED PROTEIN 3A) O.I. H.G. S.X.
0.61 81.2 0.97 Os01g0775600 AK122081.1 - Lissencephaly type-1-like homology motif domaincontaining protein 6e-1 At1g06060 RanBPM-related O.I. H.G. S.X.
0.42 53.9 0.97 Os08g0427300 AK066491.1 - Conserved hypothetical protein 3e-7 At1g16020 unknown protein O.I. H.G. S.X.
0.40 51.1 0.97 Os06g0105900 AK062140.1 - Conserved hypothetical protein 1e-4 At4g01290 unknown protein O.I. H.G. S.X.
0.36 44.0 0.97 Os11g0157100 AK120409.1 - Cyclin domain containing protein 4e-22 At4g19600 CYCT1 O.I. H.G. S.X.
0.36 44.0 0.97 Os07g0546100 AK100024.1 - Conserved hypothetical protein 2e-2 At1g11480 eukaryotic translation initiation factor-related O.I. H.G. S.X.
0.26 25.6 0.97 Os01g0945800 AK072850.1 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 2e-17 At4g36960 RNA recognition motif (RRM)-containing protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.6 98.8 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
13.9 98.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.2 98.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.0 98.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.7 98.2 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.7 98.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.7 98.2 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.6 98.2 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.4 98.2 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.1 98.2 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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