Co-expression analysis

Gene ID Os01g0919400
Gene name
Homology with ArabidopsisSimilar to At1g04920: ATSPS3F (sucrose phosphate synthase 3F) (HF=7e-28)
Module size 27 genes
NF 0.44
%ile 55.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9499.40.89Os01g0919400AK121341.1-Sucrose-phosphate synthase (EC 2.4.1.14)(UDP-glucose-fructose- phosphate glucosyltransferase)7e-28At1g04920ATSPS3F (sucrose phosphate synthase 3F)O.I.H.G.S.X.
0.7088.40.92Os03g0807900AK060962.1-Conserved hypothetical protein2e-16At5g19855unknown proteinO.I.H.G.S.X.
0.6382.70.92Os02g0816600AK071389.1-Hypothetical protein3e-49At3g24190ABC1 family proteinO.I.H.G.S.X.
0.6079.70.93Os07g0637300AY026039.1-Pyruvate dehydrogenase kinase isoform 2 (EC2.7.1.99)3e-25At3g06483PDK (PYRUVATE DEHYDROGENASE KINASE)O.I.H.G.S.X.
0.5978.00.93Os05g0148700CB634103-ARM repeat fold domain containing protein1e-16At1g66330senescence-associated family proteinO.I.H.G.S.X.
0.5877.00.92Os03g0684400AK100086.1-Mg2+ transporter protein, CorA-like family protein1e-30At5g22830ATMGT10 (MAGNESIUM (MG) TRANSPORTER 10)O.I.H.G.S.X.
0.5471.90.94Os04g0583000AK065769.1-TPR-like domain containing protein7e-2At4g02380SAG21 (SENESCENCE-ASSOCIATED GENE 21)O.I.H.G.S.X.
0.5068.00.94Os05g0170900CB679962-Phosphate/phosphoenolpyruvate translocator1e-1At2g30766unknown proteinO.I.H.G.S.X.
0.5068.00.94Os11g0216300AK067129.1-ABC-1 domain containing protein8e-76At4g31390ABC1 family proteinO.I.H.G.S.X.
0.4762.30.94Os07g0626400AK100600.1-Heat shock protein DnaJ, N-terminal domaincontaining protein3e-21At1g77930DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.4660.90.92Os08g0440800AF357884.1-Glyceraldehyde-3-phosphate dehydrogenase3e-88At4g23100GSH1 (GLUTAMATE-CYSTEINE LIGASE)O.I.H.G.S.X.
0.4558.80.95Os07g0656700AU173917-Protein of unknown function DUF1334 family protein4e-11At5g13720-O.I.H.G.S.X.
0.4458.10.92Os06g0704700AK120907.1-Conserved hypothetical protein1e-34At1g16720HCF173 (high chlorophyll fluorescence phenotype 173)O.I.H.G.S.X.
0.4253.90.95Os08g0432500AK106170.1-ATP-dependent Clp protease adaptor protein ClpSfamily protein3e-2At3g61678unknown proteinO.I.H.G.S.X.
0.4253.90.94Os11g0603200AK059060.1-ABCF-type protein1e-19At5g64840ATGCN5 (A. THALIANA GENERAL CONTROL NON-REPRESSIBLE 5)O.I.H.G.S.X.
0.4152.40.93Os08g0566600AK066210.1-Conserved hypothetical protein3e-2At2g05620PGR5 (proton gradient regulation 5)O.I.H.G.S.X.
0.4152.40.93Os12g0626400AK063967.1-Squalene/phytoene synthase family protein7e-10At5g17230phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferaseO.I.H.G.S.X.
0.3948.30.94Os09g0296800AK066997.1-Chlorophyll A-B binding protein family protein2e-1At5g54270LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3)O.I.H.G.S.X.
0.3846.90.93Os03g0744700AK071178.1-Conserved hypothetical protein4e-2At1g62250unknown proteinO.I.H.G.S.X.
0.3440.00.92Os02g0704300AK058932.1-Hypothetical protein3e-6At5g35970DNA-binding protein, putativeO.I.H.G.S.X.
0.3338.80.95Os03g0704100AK070474.1-PAP fibrillin family protein2e+0At1g35410-O.I.H.G.S.X.
0.3338.80.93Os03g0284600AK110712.1-Conserved hypothetical protein1e-1At2g37240-O.I.H.G.S.X.
0.3236.30.95Os03g0128800AK066570.1-Conserved hypothetical protein7e-1At1g23530unknown proteinO.I.H.G.S.X.
0.3032.70.92Os04g0432400AK061496.1-Plant neutral invertase family protein2e-23At1g72000beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeO.I.H.G.S.X.
0.2524.10.93Os03g0583800AK064786.1-Mpv17/PMP22 family protein1e-8At1g52870peroxisomal membrane protein-relatedO.I.H.G.S.X.
0.2321.20.93Os01g0830000AK121100.1-SufB7e-5At4g04770ATABC1 (ATP BINDING CASSETTE PROTEIN 1)O.I.H.G.S.X.
0.2117.90.93Os02g0556800AK100187.1-Conserved hypothetical protein3e-2At1g04445zinc finger (C2H2 type) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.398.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.998.5GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
12.898.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.298.0GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.897.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0511GO:0009765Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.Link to AmiGO
0.0221GO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.Link to AmiGO
0.0131GO:0009058The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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