Co-expression analysis

Gene ID Os01g0901500
Gene name
Homology with ArabidopsisSimilar to At5g63380: 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein (HF=9e-1)
Module size 27 genes
NF 0.34
%ile 38.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7289.80.87Os01g0901500BI813803-4-coumarate-CoA ligase-like protein9e-1At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinO.I.H.G.S.X.
0.5371.30.90Os04g0502800AK099877.1-Nodulin-like protein3e-1At1g80530nodulin family proteinO.I.H.G.S.X.
0.5269.60.92Os01g0833200AK121629.1-Conserved hypothetical protein5e-4At2g35820unknown proteinO.I.H.G.S.X.
0.4558.80.91Os03g0426800AK099511.1-Ubiquitin domain containing protein4e-4At1g77870MUB5 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 5 PRECURSOR)O.I.H.G.S.X.
0.4558.80.91Os09g0539100AK071977.1-3-dehydroquinate synthase domain containingprotein1e-12At5g661203-dehydroquinate synthase, putativeO.I.H.G.S.X.
0.4458.10.90Os05g0533500CR280415-Satase isoform III7e-1At4g28270zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4253.90.90Os03g0191100AK070661.1-Mitochondrial substrate carrier family protein3e-4At5g64970mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.4152.40.89Os12g0134000AK066940.1-Hydroxymethylglutaryl-CoA lyase1e-14At2g26800hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putativeO.I.H.G.S.X.
0.4051.10.91Os01g0536000AK120431.1-Serine/threonine protein kinase SOS2(CBL-interacting protein kinase 24)2e-14At4g24400CIPK8 (CBL-INTERACTING PROTEIN KINASE 8)O.I.H.G.S.X.
0.3846.90.92Os06g0213400AK071478.1-Eukaryotic protein of unknown function DUF829family protein9e-1At2g15695unknown proteinO.I.H.G.S.X.
0.3745.00.91Os09g0258000AK067978.1-Cellular retinaldehyde-binding/triple function,N-terminal domain containing protein3e-1At1g55840SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer proteinO.I.H.G.S.X.
0.3745.00.91Os02g0663100AK101035.1-GRAS transcription factor domain containingprotein2e+0At3g5866060S ribosomal protein-relatedO.I.H.G.S.X.
0.3745.00.89Os01g0171800AK067987.1-Conserved hypothetical protein2e-1At5g62960unknown proteinO.I.H.G.S.X.
0.3440.00.93Os07g0667000AK060587.1-Tubby-like protein 32e-17At1g25280AtTLP10 (TUBBY LIKE PROTEIN 10)O.I.H.G.S.X.
0.3134.50.92Os09g0516600AK103563.1-Glyoxalase II2e-7At1g06130GLX2-4 (glyoxalase 2-4)O.I.H.G.S.X.
0.3032.70.92Os02g0562700AB110167.1-Gamma hydroxybutyrate dehydrogenase (EC 1.1.1.61)7e-10At3g25530GLYR1 (GLYOXYLATE REDUCTASE 1)O.I.H.G.S.X.
0.2831.10.90Os01g0764400AK068983.1-Chorismate mutase, chloroplast precursor (EC5.4.99.5) (CM-1)2e+0At5g10870ATCM2 (chorismate mutase 2)O.I.H.G.S.X.
0.2727.50.91Os03g0159800AK067149.1-Complex 1 LYR protein family protein1e+0At2g46130WRKY43O.I.H.G.S.X.
0.2625.60.91Os10g0579600AK070527.1-TGF-beta receptor, type I/II extracellular regionfamily protein1e+0At3g44140unknown proteinO.I.H.G.S.X.
0.2524.10.93Os03g0180300AK068487.1-Smr protein/MutS2 C-terminal domain containingprotein1e+0At4g16566histidine triad family protein / HIT family proteinO.I.H.G.S.X.
0.2524.10.91Os02g0771100AB040053.1-COP1 regulatory protein (Constitutivephotomorphogenesis protein 1)3e-29At2g32950COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1)O.I.H.G.S.X.
0.2321.20.92Os10g0507600AK058656.1-Major sperm protein domain containing protein1e-1At3g60600VAP (VESICLE ASSOCIATED PROTEIN)O.I.H.G.S.X.
0.2321.20.91Os10g0375700AK068318.1-Hypothetical protein3e-1At1g78210hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.2219.40.94Os08g0457600AK065020.1-RSH28e-24At3g14050RSH2 (RELA-SPOT HOMOLOG 2)O.I.H.G.S.X.
0.1915.10.91Os02g0518100AK103390.1-Protein of unknown function DUF803 family protein5e-21At3g26670-O.I.H.G.S.X.
0.1813.70.92Os06g0134900AK103205.1-Conserved hypothetical protein4e-2At4g22740glycine-rich proteinO.I.H.G.S.X.
0.1712.60.92Os05g0408200AK100057.1-Squamosa promoter binding protein-like 5(Fragment)4e-10At5g18830SPL7 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.399.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
19.799.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.797.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0711GO:0006573The chemical reactions and pathways involving valine, 2-amino-3-methylbutanoic acid.Link to AmiGO
0.0651GO:0006098The process by which glucose is oxidized, coupled to NADPH synthesis. Glucose 6-P is oxidized with the formation of carbon dioxide (CO2), ribulose 5-phosphate and reduced NADP; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses.Link to AmiGO
0.0631GO:0015969The chemical reactions and pathways involving guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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