Co-expression analysis

Gene ID Os01g0883000
Gene name
Homology with ArabidopsisSimilar to At2g48010: RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3) (HF=7e-8)
Module size 29 genes
NF 0.35
%ile 39.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8796.60.95Os01g08830009629.m06547-Protein kinase domain containing protein7e-8At2g48010RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3)O.I.H.G.S.X.
0.7692.20.95Os01g0862400AK108182.1-Conserved hypothetical protein3e+0At3g52290IQD3 (IQ-domain 3)O.I.H.G.S.X.
0.6079.70.96Os12g02904009640.m01909--3e+0At5g43150unknown proteinO.I.H.G.S.X.
0.5471.90.96Os12g02903009640.m01908-Fe-S metabolism associated SufE family protein4e-1At1g78410VQ motif-containing proteinO.I.H.G.S.X.
0.5371.30.96Os05g05061009633.m03998-Protein of unknown function DUF569 family protein5e-1At3g61470LHCA2O.I.H.G.S.X.
0.4762.30.96Os06g02573009634.m01455--4e-1At1g08480unknown proteinO.I.H.G.S.X.
0.4558.80.97Os02g02421009630.m01355-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein1e-5At5g26310UGT72E3O.I.H.G.S.X.
0.4558.80.98Os11g05266019639.m02939--1e+0At4g1810060S ribosomal protein L32 (RPL32A)O.I.H.G.S.X.
0.4355.40.96Os08g0202500AK108353.1-Conserved hypothetical protein5e+0At5g28490LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)O.I.H.G.S.X.
0.3948.30.97Os01g02301009629.m01267--7e+0At5g55570unknown proteinO.I.H.G.S.X.
0.3948.30.97Os01g06112009629.m04080--2e+0At5g15350plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.3846.90.97Os04g04754009632.m03794--1e-1At2g4184040S ribosomal protein S2 (RPS2C)O.I.H.G.S.X.
0.3745.00.97Os02g06193009630.m03926--1e+1At5g01910unknown proteinO.I.H.G.S.X.
0.3644.00.96Os03g07820669631.m05583--1e+0At1g04520PDLP2 (PLASMODESMATA-LOCATED PROTEIN 2)O.I.H.G.S.X.
0.3644.00.97Os06g01936669634.m00891--4e+0At4g27990YGGT family proteinO.I.H.G.S.X.
0.3541.70.97Os08g0293400AK108463.1-Conserved hypothetical protein1e-1At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.3440.00.97Os01g0602600NM_192650.1--7e-1At1g04445zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.3236.30.96Os06g0203000AK108437.1--5e-4At1g48210serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.3134.50.96Os01g0524400AK111464.1-Hypothetical protein4e-2At2g45930unknown proteinO.I.H.G.S.X.
0.2931.10.97Os01g0578800AK111466.1-Conserved hypothetical protein3e+0At5g45860Bet v I allergen family proteinO.I.H.G.S.X.
0.2831.10.97Os03g04471339631.m03269--1e+0At5g14440-O.I.H.G.S.X.
0.2831.10.97Os07g0636900AK102097.1-Protein prenyltransferase domain containingprotein1e-7At3g05240pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.2831.10.97Os03g02188019631.m01113--8e-1At1g12064unknown proteinO.I.H.G.S.X.
0.2422.40.97Os03g03285019635.m00330--1e-1At5g08330TCP family transcription factor, putativeO.I.H.G.S.X.
0.2422.40.96Os07g0214700NM_186511.1--4e+0At4g37450AGP18 (ARABINOGALACTAN PROTEIN 18)O.I.H.G.S.X.
0.2117.90.97Os01g06503009629.m04417--3e-1At2g23310ATRER1C1O.I.H.G.S.X.
0.2016.50.97Os05g01094009633.m00102--3e+0At4g30097unknown proteinO.I.H.G.S.X.
0.1915.10.96Os03g03221009631.m02045--3e-1At5g66010RNA binding / nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.1712.60.96Os08g04929009636.m03875--2e+0At5g49300zinc finger (GATA type) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
35.899.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.698.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.698.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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